Rubrobacter radiotolerans: RradSPS_1915
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Entry
RradSPS_1915 CDS
T03080
Name
(GenBank) rpoA: DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rrd
Rubrobacter radiotolerans
Pathway
rrd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rrd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RradSPS_1915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rrd03021
]
RradSPS_1915
03400 DNA repair and recombination proteins [BR:
rrd03400
]
RradSPS_1915
Enzymes [BR:
rrd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RradSPS_1915
Transcription machinery [BR:
rrd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RradSPS_1915
DNA repair and recombination proteins [BR:
rrd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RradSPS_1915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AHY47198
UniProt:
A0A023X4D0
LinkDB
All DBs
Position
complement(2007974..2008909)
Genome browser
AA seq
311 aa
AA seq
DB search
MDIAPPRFRVEEEDERRGVFVAEPLPRGLGHTLGNSLRRVMLSGLTGAAATKIRIEGVQH
EFSTVEGVREDVVDMILNIKNLKFKLERDEPIELEIVKSGPGDVTAADIELKADVEVVDP
ETYIATLSSGANLDMRITVERGQGYVRAEQNKSDADPIGVIAIDSLFSPVQRVNYTVSEI
RAGARADLDSLTIEVFTDGRLEPREALNEASRQLIDILGLFAEGYQGSGGAASETSMGGR
RNVIDDVRPIEDLELTVRSYNCLKREGVDTIGQLATMTEEELMNIRNLGMKSVDEIRSKL
LELGYPIESDQ
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
ttggatatagcgccaccccgtttcagggtggaagaagaagatgagcggcgcggcgttttc
gttgcggaaccgctcccgaggggtctcggtcacacgttgggcaactcgctccggcgcgtg
atgctgagcggcctcacgggggctgctgcgaccaagatccgcatagagggcgtccagcac
gagttctcgaccgtcgagggcgtgcgcgaggacgttgtggacatgatcctcaacataaag
aaccttaagttcaagctcgagcgcgacgagccgatagagcttgagatcgtcaagagcggt
cccggagacgttaccgccgccgacatcgagctcaaggccgacgtcgaggtcgtggacccg
gagacgtacattgcgacgctctccagcggggccaacctcgacatgaggatcacggtcgag
cgcgggcagggctacgtccgggccgagcagaacaagtcggacgccgaccccatcggggtc
atcgcaatagactcgctcttctcgcccgtccagcgcgtcaactacacggtgagcgagatc
cgggccggagcccgggccgacctcgactcgctgacgatcgaggtcttcaccgacggacgg
cttgagccgcgtgaggcgctcaacgaggcctcccgccagcttatagacatcctcgggctc
ttcgccgagggctaccagggctccggcggggcggcgagcgagacctcgatgggcggcagg
cgcaacgttatagacgacgtccgcccgatagaggatctggagctgaccgtccgctcctac
aactgcctcaagcgcgagggggtggacaccatcggccagctcgccacgatgaccgaggaa
gagttgatgaacatccggaacctggggatgaagagcgtcgacgagatccgctccaagctc
ctggaactgggctacccgatcgaaagcgaccagtaa
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