Rubrobacter radiotolerans: RradSPS_2196
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Entry
RradSPS_2196 CDS
T03080
Name
(GenBank) FAD binding domain of DNA photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rrd
Rubrobacter radiotolerans
Brite
KEGG Orthology (KO) [BR:
rrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrd03400
]
RradSPS_2196
Enzymes [BR:
rrd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RradSPS_2196
DNA repair and recombination proteins [BR:
rrd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RradSPS_2196
Prokaryotic type
RradSPS_2196
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
FAD_binding_7
DUF2226
Motif
Other DBs
NCBI-ProteinID:
AHY47479
UniProt:
A0A023X5Z6
LinkDB
All DBs
Position
complement(2276694..2278079)
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AA seq
461 aa
AA seq
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MATGEVQSERVQPLNEEGVREDGDYVLYWMQASVRSRFNHALEYAVQRANDLGRRLLVVF
GLTDSYPEANLRHYTFLVEGLKDVEGNLKERGIKFVVRRGSPDDVALGEAERASLVVTDR
GYLRHQREWRERVAREAGREVVQVESDVVVPVELASDKKETAARTLRPKIKRHLEDFLVE
LEPTELEKDSTGLSVKDGLDLSDVGKVTDGMDLDRSVGALSHLYRGGESEARRVLSDFLR
NRFDSYTDNRNQPQTDSVSHMSKYLHYGHISPVEVALKVRGSSAPEKEKETYLEELIVRR
ELPMNFVFYEKNYDSFSCLPGWAKETLKKHKSDAREYAYTRAQLEEAETHDEYWNAAMRE
MKHTGYMHNYMRMYWGKKILEWSNTPEYAYSTVLYLNNKYFLDGRDPNSYANVAWVFGQH
DQGWKERAVFGKVRYMSSGGLERKAKPEEYVEKVDRLVEGR
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaggcgaggtgcaaagcgagcgcgttcagccgctcaacgaggagggcgtccgc
gaggacggcgactacgttctgtactggatgcaggcgagcgttcgctcgcggttcaatcac
gcccttgagtacgccgtacagcgcgcgaacgacctcggccggcgtctgctcgtcgtcttt
ggcctgaccgacagctaccccgaggcgaaccttcggcactacacgttccttgtcgagggc
ctcaaggacgttgaggggaacctcaaggagcgcgggataaagttcgtcgtccggcgtgga
tctccggacgacgtcgcgctcggggaggccgaacgggcctcgctcgtcgtcaccgaccgg
ggctacctccgccaccagcgcgagtggcgcgagcgcgtcgcgcgcgaggccggccgcgag
gtcgtccaggtcgagtcggacgtcgtcgtgcccgtggagctcgcctccgacaagaaggag
accgccgcaagaacgctccgtccgaagataaagcgccacctcgaagacttccttgtggag
ctcgagcctacggagcttgagaaggactcgaccgggctctccgtcaaggacggcctcgac
ctctcggacgtcgggaaggttacggacgggatggacctcgaccggagcgtgggggcgctc
tcgcacctgtaccggggcggtgagtccgaggcgcggcgggtcctctcggactttctccgg
aaccgcttcgactcctacaccgacaaccgcaaccagccgcagaccgacagcgtctcgcac
atgagcaagtacctccactacggccacatctcgcccgtcgaggtcgcgctgaaggtccgg
ggctcctccgcacccgagaaggagaaggagacctacctggaggagcttatcgtacggcgg
gagctgccgatgaactttgttttctacgagaagaactacgacagcttctcgtgcctgccc
ggctgggcgaaggagaccctgaaaaagcacaagagcgacgcccgggagtacgcctacacg
agggcacagctcgaagaggccgagacgcacgacgagtattggaacgccgcgatgcgcgag
atgaagcacaccggctacatgcacaactacatgcggatgtactggggaaagaagatcctt
gagtggtccaacacccccgagtatgcctactcgaccgttctctacctcaacaacaagtac
tttctggacggtcgcgacccgaactcctacgcgaacgtcgcctgggtcttcggtcagcac
gaccagggctggaaggagcgggccgtcttcggcaaggtccgctacatgtcctcgggtggt
ctcgaaagaaaggccaagcccgaagagtacgtcgagaaggtggaccggctggtagagggc
cgctga
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