| Entry |
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| Name |
(GenBank) UvrD-like helicase C-terminal domain
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| KO |
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| Organism |
rrd Rubrobacter radiotolerans
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:rrd00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RradSPS_2545
03430 Mismatch repair
RradSPS_2545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:rrd03400]
RradSPS_2545
Enzymes [BR:rrd01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RradSPS_2545
DNA repair and recombination proteins [BR:rrd03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RradSPS_2545
MMR (mismatch excision repair)
Other MMR factors
RradSPS_2545
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(2641849..2645016)
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| AA seq |
1055 aa
MLRARRGNTPEQQRVIMLEGGPARVLAGAGSGKTHTMTEFVARKVRDFAEGYGGVAPERI
VAITFTVKAAGEMRERLVSRLGEAALKLTVANFHSLAFDLARRNATALGIPEDAPVLREA
RAWLMVLDDLASEDLSLRRLDLSDPATVAQNTQRLLGESRNELVGLDEVRRRTERDLEDP
RTTDALRRVFEERLDLVKLAERFEERRGRLGMLQYGNMVEMAVRVLEDRSLGQPYRDRYD
LVVVDEFQDTNPAQMRLVELLADGDASKVVVIGDDLQSIFGFQGAAVRNIRNFERWAEKR
AGGDPGRMDYSLTRNFRSARRILALANHVAREVHPEGSPEEPKVLDPRDDAPEGEVSAFV
EPTDADEAEEISRRIKRLVGEGGDYSTCAVLIRNWSQAAPVLSALTDAGIPCEVVRGGEL
LARPEVRYLTDFLRLVHEPGYAAQALVRTLFRPPYSFSDGDLRVVCEGAGGPWRATLEPD
AVEHVSREARERLRRLRGVLSALEGERSVSQSLAEFVERAVEATGLGREVRSSPSNEARL
AEHHLAAFREVASEFGEVERLGEFLRYVEFSEGSRLSENAEPPEVSGGAVVLTTVHRAKG
LEFDHVFVPGLSAGHFPNPAAGTDNALRKAHRLPPPLKRDPDPQASAAYDALDEESLKEA
VRRESEEEEGRLFYVAVTRARETLTLSRACFYRENRRAKKAGLFWEISRNSPPACGVPAP
EEPPLPEANPNLPVFGVSEPPEPDGFPLAATAGTEADEVRLAEELGVKGDYEDELDGLRA
DLANIPEVERPEYVLPAPETHSPSSLMEFETCPRRYYYGHVFPVVDLLPRGDESRDYGTV
WHRWIEAGAPGDPPEPLRREDSPAGHRDAGPAKARPAVAAFRETEYGRRASTYPLHTGDT
PPRTGPARMVEVPFSFEVDAATVRGRIDAVFVDPDGTLHIVDWKSGKAGASYRERLQLPL
YALAAVRLWDVAPERIRLAYAFASGETVEVPFGESSVEATEERVRAALRSIRSGDFPPEP
SDYACNHCPVFGIGIEGCPKDEEELGQMEDSNSAG |
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| NT seq |
3168 nt +upstreamnt +downstreamnt
atgcttagggcgcggcgcgggaacacccccgagcagcagcgggtcattatgcttgaaggc
ggaccggcgcgggtgctcgccggagccgggagcggaaagacgcacacgatgacggagttc
gtggcgcgcaaggtccgggactttgccgaaggctacggaggcgtcgcgccggagcggata
gtggcgatcaccttcaccgtcaaggccgccggggagatgcgcgagcggctcgtctcgcgc
ctgggtgaggccgcactgaagctgacggtcgcaaacttccacagcctggccttcgacctt
gcgcgccggaacgcgaccgcgctcggcatcccggaggacgcccccgtgctgcgcgaggcg
cgcgcgtggcttatggtgctggatgacctcgcctccgaggacctctccctcagaaggctc
gacctctccgacccggcgaccgtggcgcagaacacccagcggctccttggcgagtcgcga
aacgagcttgtcgggctcgacgaggtccgaagaagaaccgagcgcgacctcgaagacccg
cgcacaacggacgctctgcggcgcgtctttgaggaacgactcgacctcgtaaagctcgcc
gagcgcttcgaggagaggcgcgggcggctcgggatgctccagtacgggaacatggtcgag
atggcggtccgggtgctggaggacaggagcctcggacagccgtaccgggaccgctacgac
ctcgtcgtcgtggacgagttccaggacaccaacccggcccagatgcgtctcgtcgagctg
cttgccgacggcgacgcctcgaaggtagtcgtgatcggcgacgacctccagagcatcttc
ggcttccagggcgcggcggtccgcaacatccggaacttcgagcggtgggcagagaagcgg
gccgggggcgacccgggacggatggactactcgctcacaaggaacttccgctccgcgcgg
cgcatcctcgcccttgcaaaccacgtcgcgcgagaggtccatcccgagggcagtccggag
gaaccgaaggtgctcgacccccgcgacgacgcgccggagggtgaggtctcggcctttgtc
gagccgaccgacgccgatgaggcggaggagatctcccgccgcataaagcgccttgtcggg
gagggcggggactactcgacgtgcgcggtcctgatccggaactggtcccaggctgctccg
gtgctctcggctctcacggacgcgggcatcccgtgcgaggtcgtccgcggcggcgagctg
ctcgctcgtccggaggtccgctacctgaccgactttctccgccttgtccacgagccgggg
tacgccgcacaggcccttgtccgcacgctctttcgtccgccgtacagcttctccgacggc
gacctgcgcgtcgtctgcgagggagcgggcggcccctggcgggcgactctggagccggac
gctgtagagcacgtctcccgcgaggcccgggagcggctgcggcggttgaggggcgtcctc
tcggcccttgagggggagcgttcggtctcgcagtcgcttgcggagttcgtggagcgggcg
gtcgaggcgacgggtctcgggcgggaggtgcgctcctcgccgtcgaacgaggcgcgcctc
gccgagcaccacctcgcggcgttccgggaggttgcgtcggagttcggggaggtggagcgg
ctcggggagttcttgcgctacgtcgagttctccgagggttcgcggctctccgagaacgcc
gagccgccggaggtttcggggggcgccgtggtgctcacgacggtgcaccgcgcgaagggg
ctcgagttcgaccacgtctttgttcccggcctctccgccgggcacttcccgaaccccgca
gcgggcacggacaacgcgctccgcaaggctcaccgccttccgccgcccctaaagcgcgac
ccggacccgcaggcgagcgcggcctacgacgctttggatgaggagagcctcaaggaggct
gtccggcgcgagtcggaggaagaggagggacgtcttttctacgtagcggtgacccgcgcc
cgcgagacgctgaccctgagccgggcctgcttctaccgggagaaccggcgggcgaaaaag
gccgggctcttctgggagatctcccgaaactcgccgcccgcctgcggcgtccccgccccg
gaagagccgccccttccagaggcgaacccgaacctgcccgtcttcggggtctcggagcct
cccgagccggacggcttcccgcttgcggcgaccgccgggacggaggccgatgaggttcgc
ctcgcagaggagctcggggtaaagggggactacgaggacgagctcgacgggcttcgcgcg
gacctcgcgaacatcccggaggtcgagcgaccggagtacgtactacccgcaccggagact
cactcgccctcctctcttatggagttcgagacgtgcccgagacgttactactacggacac
gtcttcccggtcgtggacctgctcccccggggagacgagagccgcgactacgggacggtc
tggcaccggtggatcgaggccggagcgccgggcgaccctcccgaacctctccgcagagaa
gactcccccgccggccaccgcgacgccggccctgcgaaagcccgtccggcggtcgccgcc
ttccgggagacggagtacggcaggagagcctccacctacccgcttcacacaggcgacacg
ccgccccggacgggaccggcgcggatggtcgaggtaccgttctccttcgaggtcgacgcg
gcgaccgtccggggccggatagacgccgtcttcgtggacccggacgggacgctccacatc
gttgactggaagagcggaaaagcaggagcgtcgtaccgggagaggctccagctcccgctc
tacgcacttgcggcggtccggctctgggacgttgcgccggagaggatccggctcgcctac
gccttcgcgagcggagagacggtcgaggtcccgttcggcgagagctccgtcgaggcgacg
gaggaaagggtccgggcagcgctccgcagcatccggtccggagacttcccacccgagccg
tccgactacgcttgcaaccactgcccggtcttcggcatcgggatagagggctgtccgaag
gacgaagaggaactgggacagatggaggatagtaacagtgccggatag |
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