Rubrobacter radiotolerans: RradSPS_2676
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Entry
RradSPS_2676 CDS
T03080
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rrd
Rubrobacter radiotolerans
Pathway
rrd00300
Lysine biosynthesis
rrd01100
Metabolic pathways
rrd01120
Microbial metabolism in diverse environments
rrd01230
Biosynthesis of amino acids
Module
rrd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rrd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RradSPS_2676
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rrd01002
]
RradSPS_2676
Enzymes [BR:
rrd01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
RradSPS_2676
Peptidases and inhibitors [BR:
rrd01002
]
Metallo peptidases
Family M20
RradSPS_2676
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
AHY47959
UniProt:
A0A023X7C1
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All DBs
Position
2777462..2778556
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AA seq
364 aa
AA seq
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MSEAPGAAEKRLVGDLLWLLERKSPTGSEGPLCDDLEARLAALPGFESVRAGNNLALRRA
RPDGSRPKVVFAGHLDTVPEPKEPLPVRAEGGLVYGRGSSDMKAGDAVMLSLLENFDWDG
SWAEPVFVFYEREEGPHLENGLEVVFSEMPWVLDADLAIVPEPTEGVVEAGCVGTAQVEV
TFRGKAAHSARPWLGLNAATLAGVFLSELHEREPEEVVVDGLSFYEVASVTMVRGGTAKN
VVPDSLWANVNLRFAPGRGRDHVESVFRGLLSGLPADAAEFEVTDFAPSGPVDLSHPLVK
KLLESGLEVRPKQAWTDVARFAERGVAAVNLGPGTPAQAHGDTEHARVDLLVECHARLAD
FLSG
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgaagcgccgggcgccgcggagaagcggctcgtcggggaccttctctggcttctc
gaacgcaagagcccgaccggttcggaggggccgctctgcgacgacctcgaagcccggctc
gcagccttgccgggcttcgagtcggtgcgcgcggggaacaacctcgcgctgcggcgcgcg
cgtccggacggctcaaggccgaaggtcgtctttgccggacacctcgacaccgtcccggag
ccgaaggaaccgctcccggtgcgcgcggagggggggctcgtctacgggcgcggctcgtcg
gacatgaaggccggagatgcggtgatgctctcgctgctggagaacttcgactgggacgga
agctgggcggagccggtctttgtcttctacgagcgcgaggagggaccgcatctggagaat
ggccttgaggtcgtgttctccgaaatgccgtgggtgcttgatgcggatctcgcgatcgtc
ccggagccgaccgaaggcgttgtcgaggccgggtgcgtggggacggcgcaggtcgaggtt
acgttccgggggaaggcggcccactcggcgcggccctggctcgggctgaacgccgcgacg
ctcgcgggcgtcttcctctcggagctgcacgagcgcgagccggaagaggtcgttgtggac
gggctttcgttctacgaggtcgcctcggttacgatggtgcgcggcgggacggcaaagaac
gtcgtgccggactcgctctgggcgaacgtgaacctgcgcttcgctccgggtcgcggccgg
gatcacgtcgagagcgtcttccgggggcttctctcgggacttccggcggacgcagcggag
tttgaggtaacggacttcgccccgagcgggccggtggacctctcgcaccctcttgtaaag
aagctgctcgaaagcgggctggaggtccggcccaagcaggcctggacggacgttgcgcgc
tttgcggaacggggcgttgcggcggtcaacctcggccccgggaccccggctcaggcgcac
ggggacaccgagcacgcccgggtggaccttctcgtggagtgccacgcgaggcttgcggac
ttcctctccggctag
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