Rickettsia rhipicephali: MCC_00605
Help
Entry
MCC_00605 CDS
T01786
Name
(GenBank) cell surface antigen Sca1
Organism
rre
Rickettsia rhipicephali
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
AFC71804
UniProt:
A0AAI8A8X6
LinkDB
All DBs
Position
complement(87040..92484)
Genome browser
AA seq
1814 aa
AA seq
DB search
MNKLTEQHLLKKSRFLKYSLLASISVGAIIAIPFEGMAMSKEAFRIDLSNKLLNNLSQLN
GNKDTTNTPQQIGTVIVPEPEINTYTPSEIREMKISNKPKASNPLKDVPVEDHYKVVARS
KSDVGKARKVRPITRRKTFVGTEKTEQSQNTYTPEPTEQMPQKPEIIITTSSPTVSPASN
SFVTAPNTPNTTLISPEHYTTAPGTPSSTPATPYQPTSDSKPNDSLGANTLPNINTNSKA
VRRLSFSNSDPQQQTVQSSSQVKPEVPPKSTFVPLPIKKSSTEIAAGMVSNISRVNEMIG
IKLAEVTQAIQKNTTDTKNTKPLQKLYTQLTSAQKTIEALKSKAEKIETQIKVGENKNKI
KKLEKELTSKNNKADRLFQKIEKIDIPANKISIESQETVPVTTVSTQVSAFQAQQARINE
AQQGILVQKNQQHIAAKKTKKQQQAEDKERTEREKKQKQLSEIKKQEKAIKTAADKAKEV
AASVKKETSRTALRTMQDKTNGYSEQLNEIEANLKLLTPAVYNSSTGSTYKQPPKAKPTI
PLSHGVQRILGEQLEDEEGYLVPIKVQQQPYIVTLPSQEIEDPRSMDSGLGSLSSGTLGK
ETGEDVGFYSGWGNMPYTQAANVNSSLQLSSHSKDIYEAKASQYINYLNSIQPNQSNQAQ
IDGVIDSLVTEMRKLSADQFNQKLGEIAHLASIKAYEGLFLKLYDVQQARVPETQKVYEQ
AEIFQSYAEYEEKSRKSATPILSRSSSAKSDSSRKNNVSGSIPEIQQLQSEKMRTETLGV
QNDLGLDLHSQEERFDSGFRSLESQNLSSAYDFDQLSASWDAAYNQRMNTNAPQETLTEE
STYSGSSKKKQGNIIKRAVSKVGSILQTNDAENRKKKGDGETSKQRTVDQEGGFGHAWGN
ENHKESSLSVVSGFTKKATQLISLLDAKRTAILQTTSPSQKKSLNLVLQEIENDYQEAIK
ISQELQQVLIRKPEDIKAYNAKAEKKLDAIKSRADKHFNNIKTDADVGFNPNWGNSHSIP
TANMNSLPNLVDSTIKKGTQPLSTIYESVSYENLASETIYKTEQPKTEQPKPSVSYKNTS
KRKLPIPLFRSAELDKKLDYLDLEDKLLKVEEARIVKEKQAIAKLNQYQDPENLEFKRLA
VETRDLSSKESQLKEKRKAIEAAFSLNEEYSSTDVSISRSYSIGDISSLLSDAESNLSRS
PSVSGLEDLNNSNVMKLGELESKHDEKIANDCKAKVTESKPVFSCSSSVGSINSLSNGDD
LSSRDVVTPVDTLTIEIDKDYVDTYIRVLSNKIQKIEELPGSSSRSEELNHIKEAMAYIS
NRIQDVEELDEKMLLAINARLQEHDEKISSLLLEKYTGEEAADILAQLLLQDMLVSDGKS
ESTLPAGDEEQEDTEVTEVSRQLSSLPALASSNECALALSDDREKECLALGDGSEDEESY
DSGVEEEEETIGQLSDSDGGNLKITEVDTAIPLEQEAKKEMQTQISENAPTLNQVKVVNT
IVNNMIRNRLDASMNMSNNMVAVGAGDEEESHIKRGLWMRGMYGTNNHGRVDNMTGYRGT
NKGATIGFDAEIDNNIVGIAYSNVHSVFKFKNSKNNDKELINSHVVSIYGQKELPKNFAL
QALVSASKNFIKDKTTYSYGDTKIRSNVKHRNHSYNAEALLHYNYLLQSKLIITPNIGLR
YGKSRDGVYHETGINVQEIALTMKENNILSGIVGTKVTLPLKDALKFNNLGLTFQGAVEH
NFKEKTQRINRVVKIFDDTFKHDYLIPKQPKTSYNLGTGIIGSIKNTTISLDYNYYLNKH
YRSHQGSVKLKVNL
NT seq
5445 nt
NT seq
+upstream
nt +downstream
nt
atgaataagttaacagaacaacatttactaaaaaaatcaagatttttaaaatattctttg
cttgcctctatttcagtaggagcaataattgcaataccttttgagggtatggcgatgagt
aaagaagcatttcgtatagacctcagtaataaattgttgaataatttgtcacaattaaat
ggaaacaaagatacgacaaataccccgcagcagataggaacagtaattgtaccggaaccg
gaaataaacacatatactccatctgaaataagagaaatgaaaatatctaacaaacctaag
gcatctaatccattaaaagatgttcctgtagaggatcattataaagtggtagcacgtagt
aagtctgatgtcgggaaagcaagaaaagtacgaccaattactagacgcaaaacatttgta
ggcactgaaaaaacagaacaaagtcaaaatacttatactcctgaaccgacagaacaaatg
cctcaaaaaccagagattataataacaacgtcttcgcctactgttagtccagcttcaaat
agttttgtcactgcacctaatacaccaaatactaccctgatatcacctgaacattatact
acggcacctggtactccatcatcaacaccggcgactccgtatcagcctacttcagattct
aaaccaaatgatagtttaggagctaatacactaccaaacataaacacaaactcaaaggca
gtacgcagattatcgtttagcaatagcgacccgcaacaacagacagtgcaatctagctca
caggttaaaccagaagttcctccgaagtcgacatttgtaccgttgcctataaaaaaaagc
agtactgaaattgcagcaggaatggtaagtaatatatcacgagttaatgagatgatagga
atcaagttagctgaagtaacacaggctattcaaaaaaataccacagatacaaaaaataca
aaaccattgcagaagttgtatacgcagctaacttcagcacaaaaaacaatagaagcactc
aagtcaaaagctgaaaagatagaaacacaaatcaaagtaggtgaaaataaaaataaaata
aagaaacttgaaaaagagttaacaagtaaaaacaataaagcagatagattatttcagaaa
atagaaaaaatagatattccagcaaataaaatttcgatagaatcgcaggaaacagttccg
gttacaacggtgtcaacccaagttagtgcgtttcaagcacagcaagcaagaattaatgag
gctcagcaaggtatattagtacaaaaaaatcaacaacatattgctgcaaaaaaaacaaaa
aaacagcaacaagcagaggataaggaaagaacagaaagagaaaagaaacaaaagcagtta
tcagaaataaagaaacaagaaaaagctataaaaacggcagcagataaagctaaagaagta
gctgctagtgtgaaaaaagaaacaagtagaacggcattacgaaccatgcaagataaaacg
aatggttattctgaacaattaaatgagatagaggcaaatctaaagttattaactcctgct
gtttataatagttctaccggttctacttataagcagccgccaaaagcaaagccaaccata
ccattaagtcatggggttcagagaattttaggtgaacaactagaggatgaagaggggtac
ttagtaccaataaaagttcagcagcaaccttatatagtaacattgccaagtcaagaaata
gaggaccctagaagtatggattcaggattggggagcttatcaagcggcactttaggtaaa
gaaacaggtgaagatgttggattttattcaggttggggaaatatgccgtatacgcaagct
gctaatgtgaatagttcattacagctttcaagtcattcaaaagatatttacgaggctaag
gcttcacaatacattaattatttgaatagcatacagccaaatcagtcaaatcaagctcaa
atagatggtgtaatagatagtttagtgacagaaatgagaaagttaagtgcggatcaattt
aatcaaaaattaggtgagattgcacatcttgccagtataaaggcatatgaaggtttgttc
ttgaaattatatgacgttcagcaagctagagttccggaaactcaaaaagtatatgagcaa
gcggaaatatttcagtcttatgcagagtatgaagagaagtcaagaaaaagcgctactcca
atattatcacgctcgtcttcagctaaaagtgactcatcgaggaaaaataatgtaagtgga
agtattccggagatacaacaattgcaatcagaaaaaatgcgtaccgaaactttaggtgtg
cagaatgatctagggttagatttacattcacaagaagaacgttttgattcaggctttagg
agtttggaaagtcaaaatttgtcgtcagcctatgatttcgatcaactatcagcgagttgg
gatgcagcgtataaccaaagaatgaatacaaatgcacctcaagaaactttaactgaagaa
agtacctattcaggttctagtaagaaaaaacaaggtaatataataaagagagctgtatca
aaagtagggtcaattttgcaaacaaatgatgcagagaacagaaaaaagaaaggagatgga
gaaacctcaaagcaaagaacagtagatcaagagggaggatttggccacgcttggggaaat
gagaatcataaggagtctagtttaagtgtagttagtggattcacaaaaaaggcaactcag
cttataagccttttagatgcaaagagaaccgcaatactgcaaacaaccagtccttcacaa
aaaaaatcacttaatttagttttacaggaaatagaaaatgattaccaagaagcaattaaa
atctctcaagaattacagcaggtattaatacgcaaaccggaagatataaaagcatataat
gcaaaagcagaaaaaaaattggatgctattaaaagcagagcagataaacactttaataat
ataaaaacagatgcagatgttggatttaatccaaattggggaaatagccattctataccg
actgctaatatgaatagcttaccaaatttagttgatagtactattaaaaaaggtacacag
ccattatctactatatatgagtcggttagttatgagaatttagcatcagaaacaatatat
aagacagagcaacctaagacagagcaacctaagccatctgtaagttacaagaatactagt
aaacgaaaattacctataccattattcagaagtgccgagcttgacaagaaattagattat
ttggatttagaagataaactattaaaagtagaggaagctagaatagttaaggaaaagcaa
gctattgccaaattgaatcaatatcaagatccagaaaacctagaatttaagcggttagct
gtagaaacacgagacttatcttcaaaagaatcacaattaaaagaaaaaaggaaagccata
gaagcagcattttctttaaatgaagagtattcaagcacagatgtatcaatatcacgttcc
tattcaattggtgacataagcagtttacttagtgatgcagaatcaaatctatcccgttca
ccttcggttagtggcttagaggatttaaacaattctaatgttatgaaattaggggaatta
gaatctaaacatgatgaaaaaatagccaatgattgtaaagctaaggtaactgagagtaag
ccggtattttcatgttcatcttcagttggtagcataaacagcttatctaatggtgatgat
ttgagtagtcgtgatgttgtaactccggtagatactctaactatagaaattgataaagat
tatgtagatacctatataagagtattaagcaataaaatacaaaaaatagaagaattgcct
ggctcaagttctagaagtgaggaacttaatcatattaaagaagcaatggcttatataagt
aatcgtatacaggatgtagaggaattagatgaaaaaatgcttttagcaataaatgcacga
ttacaagaacatgatgaaaaaatttcttcgttacttctagagaagtatacaggcgaagaa
gctgcagatattcttgctcagttattgttacaagacatgttagtgtcggatggtaaatca
gaatctaccttacctgcaggagatgaagaacaagaagacacagaagtaacagaagtaagt
agacaattatcttcattacctgcacttgcatcaagtaatgagtgtgcattagcattaagt
gacgatagagaaaaggaatgtttagcattaggcgatggtagcgaagatgaagaaagttat
gattcaggggttgaagaggaagaagaaacaatagggcaattatccgattccgatgggggt
aatcttaaaataacggaagttgatacggctattcctcttgaacaggaagcaaaaaaagaa
atgcaaacgcaaatttcagaaaacgctcctactttaaatcaagtgaaagttgttaatact
attgtaaataatatgattcgtaacagattagatgcatctatgaatatgtctaataatatg
gtagcagtaggagccggtgatgaagaagagtctcatataaaaagaggtttgtggatgcgt
ggtatgtacggcactaataatcatggacgcgttgacaatatgaccggttatagaggtact
aacaaaggtgctactatcgggttcgatgctgaaatcgacaataatatcgtaggtatagct
tatagtaatgttcattcagtatttaaatttaaaaatagtaaaaataatgataaagaactt
attaatagtcatgtggtttctatttacggacaaaaagaattaccgaagaattttgcacta
caagctttagtatctgcttctaaaaactttattaaagataaaacaacttattcatatggt
gatactaaaattagaagtaatgtaaaacatcgtaatcatagttataatgcggaagcatta
ctgcattataattatcttttgcagagcaagctcattattaccccgaatatcggcttaaga
tacgggaagtcacgagacggggtatatcatgaaaccggtattaacgtacaagaaatagct
cttacaatgaaagagaataatatattgtccggaattgtcggcactaaagtcacactacct
ttaaaagatgctctaaaatttaataatttaggtctaacattccaaggagcggtagaacat
aattttaaagagaaaacccaaagaataaatagagttgttaaaatatttgatgatacattc
aaacatgattatctaataccgaagcaaccgaaaacatcctataatttaggaacgggtatt
ataggcagtatcaaaaatactactatttcgttggattataattattatctaaataaacat
tatagaagtcatcaaggtagtgttaagcttaaggtaaacctataa
DBGET
integrated database retrieval system
