Rickettsia rhipicephali: MCC_04045
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Entry
MCC_04045 CDS
T01786
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rre
Rickettsia rhipicephali
Pathway
rre03420
Nucleotide excision repair
rre03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MCC_04045
03430 Mismatch repair
MCC_04045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rre03400
]
MCC_04045
Enzymes [BR:
rre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MCC_04045
DNA repair and recombination proteins [BR:
rre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MCC_04045
MMR (mismatch excision repair)
Other MMR factors
MCC_04045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
AAA_12
DUF87
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
AFC72386
UniProt:
A0AAI8A9N3
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All DBs
Position
693361..695322
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AA seq
653 aa
AA seq
DB search
MQNQDFIHTLNSEQQKAVLHTEGPLLLLAGAGTGKTKVLTSRIANIIHQNLASPQNILAV
TFTNKAAKEMAERVNSLINCYGLNIGTFHSMAARILRDQIEHLNLGLNNRFTIISHDDQL
KLVKDIVKLKDIDTKKYAPKLIHIIISRWKDQGLLPTKLSVSDTNLPLQRVAKLVYEEYQ
KNLLISNVLDFGDLLLYNNELFIKNPEILRYYQEKYRYILIDEYQDTNVVQYLWARILAS
LYKNICCVGDDDQSIYGWRGAEVGNILRFEKDFAGATIIKLEQNYRSTLPILAAASNVIN
NNKNRHGKTLWTDRESGEKIKIISCWSDKEEARYIAGEIDKLVREDRYNAGNIAILVRAG
FQTRSFEEAFINSAMPYKIIGGLRFYERMEIRDVLAYIRISLNQNDNLALERIINVPKRA
IGAASLNKIRVYALERNISNFAAIKEMLEIGEIKAKSYETLKDLVTKIDNWYERFSIDAP
INVVKTILDDSGYLEMLQEEKTEEALGRIENINEMLRAIAEFNDVHDFIEHSSLVMENEV
LETNYGGSVTIMTLHAAKGLEFDVVFLPGWEEGVFPSQRSLDEDGEKGLEEERRIAYVGI
TRAKKDLYITHAESRKIFYEIVRSYPSRFITEIPDEITIRTSSMKKYNSFYKF
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatcaagatttcatacatacattaaattcagagcagcaaaaagcagttcttcac
actgaaggaccgcttttattgcttgcaggtgcagggacaggtaaaacaaaggtacttacc
tcaagaatagctaatattattcaccaaaatttagcctcacctcaaaatattctagccgtt
acttttactaataaagctgctaaagaaatggctgaaagagttaatagtctaattaattgc
tatggtcttaatataggcactttccactcaatggcagctaggatattacgtgaccagatt
gagcatttaaatcttggtttaaataatagatttactattattagtcatgatgatcaatta
aaactagtgaaagatatagtaaagctaaaagatattgatactaaaaaatatgctcctaaa
ttaatacatatcataatttctagatggaaagatcaaggattattaccaactaaactatca
gtatcagatactaatttaccgctgcagagggttgcaaaacttgtatacgaagaatatcag
aaaaatttacttatttctaatgttttagattttggagatttgctactttataataatgag
ctttttattaaaaaccctgaaatactaagatattaccaagaaaaatatcgatatatttta
atcgatgaatatcaagacactaacgttgtccagtatttatgggcaagaatactcgcaagt
ttatataaaaatatttgctgtgtaggggatgatgatcaatctatttatggttggcgagga
gcagaagtcgggaatatattacgttttgaaaaagattttgcaggtgcaacaattattaaa
ttagagcagaattatagatcaactttgccaatacttgctgctgcttccaatgttatcaat
aataataaaaaccgtcacggtaaaacgttatggacggatagggaaagcggtgaaaagata
aaaattatctcttgttggagtgataaagaagaagcaagatatatagccggtgaaatagat
aagttagtgcgagaagatcggtataatgccggcaatattgcaatattagtacgagccgga
tttcaaacaagaagttttgaggaagcgtttataaatagtgctatgccttataaaattata
ggcggtttgcggttctatgaacgtatggaaataagagacgtgcttgcttatatccgtata
tctttgaatcaaaatgacaatctagcacttgagcgtattataaatgtgccgaaaagggca
ataggtgcagctagcttaaataaaattagagtctatgcacttgagcgaaatatttctaat
ttcgcagccattaaagaaatgctagaaataggtgagattaaagcaaaatcatatgaaact
ctaaaagatttggttactaaaatcgataattggtacgaaagatttagtatagatgctcca
ataaacgtagttaaaacaatacttgatgattccggttatcttgaaatgcttcaagaagaa
aaaaccgaagaagccttaggtagaatcgaaaatattaacgaaatgcttagagctattgct
gaatttaacgatgttcatgattttatcgaacattcaagtttagttatggaaaatgaagtg
cttgaaaccaattacggtggctctgttactataatgaccctgcacgcagctaaagggctt
gagtttgacgtggtatttttaccgggctgggaagagggtgtatttccgtctcaaagatct
ctagacgaagacggcgaaaaaggcttagaagaagaacgccgcattgcttatgtcggcatt
acgagagccaaaaaagacctctacattactcatgctgaaagcagaaaaatattttatgaa
atagtccgttcttacccttcaagattcataaccgaaatccctgatgaaattacgatcagg
acctcttctatgaaaaaatacaattctttttataagttttaa
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