Rickettsia rhipicephali: MCC_04515
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Entry
MCC_04515 CDS
T01786
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
rre
Rickettsia rhipicephali
Pathway
rre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MCC_04515 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rre03021
]
MCC_04515 (rho)
03019 Messenger RNA biogenesis [BR:
rre03019
]
MCC_04515 (rho)
Transcription machinery [BR:
rre03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MCC_04515 (rho)
Messenger RNA biogenesis [BR:
rre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MCC_04515 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
AAA_22
ATPase_2
OB_RNB
Fungal_virus_P2_C
Spore_III_AA
S1CSD-TOTE-2
NACHT
AAA
Mor
Motif
Other DBs
NCBI-ProteinID:
AFC72456
UniProt:
A0AAI8AA21
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All DBs
Position
770096..771469
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AA seq
457 aa
AA seq
DB search
MSTTNKESTAELNTESNNNHNNFAENGNIINLKQLKRKLPEELQAQAEELKIENINSLLK
QELVFAILKKSVEQGGLIVGEGVLEVLPDGFGFLRSPEVNYLAGPDDIYISPSQIRRFGL
RTGDTVEGQIRAPKAGERYFALLKVNRVNFEDPSKAYHRVHFDNLTPLYPDEKLGLELEN
NSKDSKDFSTRVIELVAPMGKGQRALIVAPPRTGKTVLLQNIAHAITTNNPEVFLIVLLI
DERPEEVTDMQRSVRGEVVSSTFDEPASRHVQLAEMVIKKAKRLVEHKKDVVILVDAITR
LARAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIENGGSLTIIGTALIETGSRMDE
VIFEEFKGTGNSEIVLDRKIADKRIYPAIDITRSGTRKEDLLVDKIILNKMWVLRRIIDP
MGSSEAIEFLLKKLENTKTNGEFFEMMKSPERPKNGL
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaactaataaagaatccacagcagaacttaacaccgaatccaataacaatcat
aataattttgcagagaacggtaatattattaatttaaaacaattaaaacgtaaattaccg
gaggaactacaagctcaagcagaagaattaaaaattgaaaatattaattcattacttaaa
caagagttagtttttgcaattttgaaaaaatccgtagagcagggaggtttaatagtggga
gagggggtacttgaagtactacctgacggatttggttttttacgttcgccggaagtaaac
tacttagcaggccctgatgatatttatatttctcctagtcagattcgtcgctttggtctg
cgtaccggtgatactgtagaaggtcagatcagagctccaaaagccggagaacgttatttt
gctttactgaaagtcaatagagtaaattttgaagacccttctaaagcttatcatcgtgtt
cattttgataatttaacccccttatatcctgatgaaaaattaggattagaacttgaaaat
aatagtaaagatagtaaggattttagtacacgggttattgaacttgttgcccctatgggt
aaaggacaacgtgcattaatagtagcaccgcctcgtacaggtaaaaccgtattattacaa
aatatagcacatgcaattacaaccaataatccggaagtatttttaatagtactgttaata
gacgaaagacctgaagaagtaaccgatatgcaacgttccgtgcgtggggaggttgttagc
tctactttcgatgaaccggcaagtaggcacgtgcagcttgcagaaatggttatcaaaaaa
gcaaagcgtttagtagaacataaaaaagatgtggtaattttagtagatgcgataacacgt
ttagctcgtgcttataataccgtagtgccgtcatcaggtaaagtattaacgggcggtgtt
gatgctaatgctcttcagagacctaaaagatttttcggagcagcaagaaatattgaaaac
ggcggttcgcttactataatcggtacggctttaattgaaaccggttctcgtatggatgag
gtaatttttgaggagtttaaaggtacaggtaattccgagatagttctagatcgtaagatt
gccgataagcgtatttatccggctattgatataactagatcaggcactagaaaagaagat
ttattagtagacaaaataatattaaataaaatgtgggttcttcgtcgtattatcgatccg
atgggtagcagtgaagcaatagaatttttactcaaaaaacttgaaaatactaaaactaac
ggtgagttttttgagatgatgaagagtcctgaacgtcctaagaacggtctatag
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