Rhodospirillum rubrum F11: F11_00020
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Entry
F11_00020 CDS
T02006
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rrf
Rhodospirillum rubrum F11
Brite
KEGG Orthology (KO) [BR:
rrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rrf03032
]
F11_00020
03400 DNA repair and recombination proteins [BR:
rrf03400
]
F11_00020
Enzymes [BR:
rrf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
F11_00020
DNA replication proteins [BR:
rrf03032
]
Prokaryotic type
DNA Topoisomerases
F11_00020
DNA repair and recombination proteins [BR:
rrf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
F11_00020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AEO46475
LinkDB
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Position
4362..6770
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AA seq
802 aa
AA seq
DB search
MTQQAYTSESIKVLKGLEAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDEALAGYCDHS
EVILNGDGSVTVCDNGRGIPVDIHREEGVSAAEVIMTQLHAGGKFDQNSYKVSGGLHGVG
VSVVNALSDWLDLRIWRDGKEHYVRFEHGEVVAPLKVVGDCGDRTGTEITFLASPAIFAI
TTYDYATLEHRLRELAFLNSGVRLLLTDKRGTEPRTTKFHYDGGIEEFVRYLDKSKTVLH
SPPVTAIGERDGMIVELSLEWTDSYHETVLCFTNNIPQRDGGTHMAGFRGGLTRTLNSYA
QDSGLMKKEKVTLTGDDMREGLTCVLSVKVPDPKFSSQTKEKLVSSEVRPVVEAVVVERL
GQWLEEHPQEARKIIGKVVEAAAAREAARRARELTRRKGALDMASLPGKLADCQNRDPAQ
SELFIVEGDSAGGSAKQGRDRGYQAILPLRGKILNVERARFDKMLSSAEIGTLIAALGTG
IGKDDFDVGKARYHKIIIMTDADVDGSHIRTLLLTFFFRQMPEVVEKGYLYIAQPPLYRA
KRGNSEQYLKDDRELEDYLLDTGLDETVYTTAAGVQMAGPDLRALVERARLARNAIAAMG
RKVPWVLLEQAAVAGAFHTEIVNDDARASAAAADVARRIDALESPLERGWTGTLAAGGGM
VFQRTLRGVTETHVIDPQVIHSTEARRLDSMAAALREFYEQPGRLRIKDGDQIIPGPMTL
INAVMAAGRKGIAIQRYKGLGEMNPEQLWETTLDPNVRRLLQVKVNQVSDAEDVFSTLMG
DIVEPRRDFIQDNALNVQNLDV
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgacccagcaggcctatacatccgaatccatcaaggttctcaaaggactggaggcggtg
cgcaagcgccccggcatgtacatcggcgataccgacgacgggtcaggcctgcaccacatg
gtctatgaggtggttgataacgccatcgacgaggcgctcgccggttactgcgatcactcc
gaggtcattctcaacggcgatggctcggtgacggtctgtgacaatggccgcggcatcccc
gtcgatatccaccgcgaggagggggtgagcgccgccgaggtgatcatgacccagctgcat
gccggcggaaagttcgaccagaattcctacaaggtgtcgggcgggctgcacggcgtgggc
gtatcggtggtcaacgccctgtcggactggcttgatctgcgcatctggcgcgacggcaag
gaacactacgtgcgcttcgagcacggcgaggtggtggcgccgctgaaggtggtgggcgac
tgcggcgaccgcaccggcaccgagatcacctttttggcctcgccggcgatcttcgccatc
accacctatgattacgccaccctggagcatcgcctgcgcgagctggccttcctcaattcc
ggggtgcggctgctgttgaccgacaagcgcggcaccgagccgcgcaccaccaaattccac
tacgacggcggcatcgaggaattcgtccgctatctcgacaagtcgaaaaccgttctgcac
agcccgccggtcacggcgatcggcgaacgcgacggcatgatcgtggaactgtcgctggaa
tggaccgacagctaccacgagacggtgctgtgcttcaccaacaacatcccccagcgcgat
ggcggcacccatatggccggcttccgcggcggtctgacccgcaccctcaacagctacgcc
caagacagcgggctgatgaaaaaggaaaaggtgacgctgaccggcgatgacatgcgcgag
gggttgacctgcgtgctgtcggtcaaggttcccgatcccaagttctccagccagaccaag
gaaaagctggtttcaagcgaggttcggccggtggtcgaggccgtggtcgtcgagcgtctg
ggccagtggctggaggaacaccctcaggaggcccgcaagatcatcggcaaggtggtggaa
gccgccgccgcccgcgaggccgcccgccgcgcccgcgaactgacccggcgcaagggcgcg
ctcgacatggccagcctgcccggcaagctggccgactgtcagaaccgcgatccggcccag
tccgaactgttcatcgtcgagggagactccgccggcggctcggccaagcaggggcgcgat
cgcggctatcaggcgatcttgccgttgcgcggcaagatcctcaacgtcgagcgggcgcgc
tttgacaagatgctatcctcggcggaaatcggcacgctgatcgccgcgcttggcaccggc
atcggcaaggatgatttcgatgtcggcaaggcccgctaccacaagatcatcatcatgacc
gacgccgacgtcgacggcagccatatccgcaccctgctgttgaccttcttcttccgccag
atgcccgaggtcgtcgagaagggctatctttatatcgcccagccgccgctgtatcgggcc
aagcgcggcaattccgagcagtacctcaaggacgaccgcgagcttgaggactatctgctg
gataccggcctggatgagaccgtctacaccaccgccgccggcgtgcagatggccggtccc
gatctgcgcgccctggtcgaacgcgcccgccttgcgcgcaacgccatcgccgccatgggc
cgcaaggtgccgtgggtcttgcttgaacaggcggcggtcgccggggccttccataccgag
atcgtcaatgacgacgcccgcgccagcgccgcggccgccgatgtcgcccgccggatcgac
gccctggaaagcccgctggaacgcggctggaccggcaccctggccgccgggggcggcatg
gtgttccagcgcacgctgcgcggggtgaccgagacccatgtcatcgatccccaggtcatc
cacagcaccgaggcccgccggcttgactccatggcggccgccttgcgcgaattctatgag
cagcccggtcgcctgcggatcaaggacggcgaccagatcatccccggcccgatgaccttg
atcaacgccgtgatggccgccggccgcaagggcatcgccatccagcgctataagggcctg
ggcgagatgaaccccgagcagctgtgggaaaccacccttgatcccaatgtgcgccgcctg
ctgcaggtgaaggtcaatcaggtcagcgacgccgaggatgtgttcagcaccctgatgggc
gacatcgtcgaaccccgccgcgactttatccaagacaacgccctgaacgtccagaacctg
gacgtttaa
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