Rhodospirillum rubrum F11: F11_00820
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Entry
F11_00820 CDS
T02006
Symbol
groEL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rrf
Rhodospirillum rubrum F11
Pathway
rrf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rrf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F11_00820 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rrf03019
]
F11_00820 (groEL)
03110 Chaperones and folding catalysts [BR:
rrf03110
]
F11_00820 (groEL)
03029 Mitochondrial biogenesis [BR:
rrf03029
]
F11_00820 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rrf04147
]
F11_00820 (groEL)
Enzymes [BR:
rrf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
F11_00820 (groEL)
Messenger RNA biogenesis [BR:
rrf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
F11_00820 (groEL)
Chaperones and folding catalysts [BR:
rrf03110
]
Heat shock proteins
HSP60 / Chaperonin
F11_00820 (groEL)
Mitochondrial biogenesis [BR:
rrf03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
F11_00820 (groEL)
Exosome [BR:
rrf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
F11_00820 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
F11_00820 (groEL)
Exosomal proteins of breast cancer cells
F11_00820 (groEL)
Exosomal proteins of colorectal cancer cells
F11_00820 (groEL)
Exosomal proteins of bladder cancer cells
F11_00820 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AEO46634
LinkDB
All DBs
Position
187808..189439
Genome browser
AA seq
543 aa
AA seq
DB search
MAAKDVKFSSDARDRLLRGVDTLANAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEI
ELKDKFENMGAQMLREVASKSADVAGDGTTTATVLAQAIVREGSKAVAAGMNPMDLKRGI
DLAVAAVVKDVKTRSRKIATNDEIAQVGTISANGDEEVGKIIARAMDKVGHEGVITVEEA
KGLDTELDVVEGMQFDRGYLSPYFVTNAEKMVADLENPYILIHEKKLSGLQPLLPVLEAV
VQSGRPLLIIAEDVEGEALATLVVNRLRGGLKVASVKAPGFGDRRKAMLEDIAILTGGQV
ISEDLGIKLETVTLDMLGTAKTVTITKDNTTIVDGAGVKADIDARCAQIRATIEDTTSDY
DREKLQERLAKLSGGVAVIRVGGASEVEVKEKKDRVDDAMHATRAAVEEGIIAGGGVALL
HAAKALDALSPANADQKVGIEIVRRALQAPVRQIAENAGVDGAVVAGKLLESSDADFGYN
AQTGVYENLVKVGVIDPTKVVRTALQGAASVASLLITTEAMVAEIPEKKPALPAGGGMGD
MDF
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaagacgtcaagttttccagcgacgcccgtgatcgcctgctgcgcggcgtc
gacaccctggccaatgcggtcaaggtgacgctcggccccaagggccgcaacgtggtgatc
gacaaaagcttcggcgccccgcgcatcaccaaggacggcgtgtccgtcgccaaggaaatc
gaactgaaggacaagttcgagaacatgggcgcgcagatgctgcgcgaggtcgcctccaaa
tccgccgatgtcgccggcgatggcacgaccaccgccaccgtgctggcccaggccatcgtc
cgcgagggcagcaaggcggtcgccgccggcatgaacccgatggacctcaagcgcggcatc
gatctggcggtcgccgccgtcgtcaaggacgtgaagacgcgctcgcgcaagatcgccacc
aatgatgaaattgcccaggtcggcaccatctcggccaatggcgatgaagaggtcggcaag
atcatcgcccgggcgatggacaaggtcggtcacgagggcgtgatcaccgtcgaggaggcc
aagggcctcgataccgagctcgacgtggtcgaaggcatgcagttcgatcgcggctatctg
tcgccctatttcgtgaccaacgccgagaagatggtcgccgatctggaaaacccctacatc
ctgatccacgaaaagaagctctcgggcctgcagccgctgctgccggtgctcgaagccgtc
gtccagtcggggcggccgctgctgatcatcgccgaagatgtcgagggcgaggccctggcc
accctggtggtcaaccgtctgcgcggcggcctcaaggtcgcctcggtcaaggccccgggc
tttggcgatcgccgcaaggcgatgctcgaagacatcgccatcctgaccggtgggcaggtg
atcagcgaagacctgggcatcaagcttgagaccgtcaccctcgacatgctgggcacggcc
aagacggtgacgatcaccaaggacaacaccaccatcgtcgacggcgccggcgtcaaggcc
gatatcgacgcccgctgcgcccagatccgcgccaccatcgaagacaccactagcgattac
gaccgggaaaagctgcaagaacgtctggccaagttgtcgggcggcgtcgcggtgatccgg
gttggcggtgccagcgaagtcgaggtcaaggagaagaaggaccgcgtcgacgacgcgatg
cacgccacccgcgccgccgttgaggaaggcatcatcgccggcggcggtgtcgccctgctg
catgcggccaaggccctggacgccctgagcccggccaacgccgatcagaaggtcgggatc
gagatcgtgcggcgcgccctgcaggcgccggtgcgccagatcgccgagaacgccggcgtc
gatggcgccgtggtcgccggcaagctgcttgaaagctccgatgccgatttcggctacaac
gcccagaccggggtctatgagaatctggtcaaggtcggggtgatcgatccgaccaaggtc
gtgcgcaccgccctccagggggcggcctcggtggcctcgctgctgatcaccaccgaggcg
atggtcgccgaaatccccgagaagaagccggccctgcccgccggcggcggcatgggcgac
atggacttctaa
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