Rhodospirillum rubrum F11: F11_01345
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Entry
F11_01345 CDS
T02006
Name
(GenBank) phage SPO1 DNA polymerase-like protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rrf
Rhodospirillum rubrum F11
Pathway
rrf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rrf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
F11_01345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrf03400
]
F11_01345
Enzymes [BR:
rrf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
F11_01345
DNA repair and recombination proteins [BR:
rrf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
F11_01345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AEO46739
LinkDB
All DBs
Position
330933..331880
Genome browser
AA seq
315 aa
AA seq
DB search
MSTDALPPPPARQAGPLSAPGSFLGQGGEEGHGFDLAGLLGWYLEAGVDLAVGDSPLDRY
ALSERAPVPRVAPPAARPPTPAASRPTGRTPGGPRIEDGGPNDEPPTQAESQRAASFLAA
QAGSLEDLRTALDSFRSCALRRTATQTVFADGCPQSGMMIIGEAPGADEDRLGRPFVGVS
GKLLDAMLGSIGLDRADSCYITNVVPWRPPGNRKPTADEVALCLPFLERHIALVRPRLIL
AVGGLAAQALFGRSEGITRLRGHWHDYEGPGLDRSVPVLATFHPAYLLRTPAQKRLAWRD
LLALRQRLDSLPSLS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgacgcccttcccccgccgccggcccgacaggccggcccgctttccgctccc
ggttcgttcctcggccaggggggcgaagaggggcatggctttgatctcgccgggcttctt
ggctggtatcttgaagccggggtggatctggcggtgggtgacagcccgcttgaccgctat
gccctgagcgaacgcgcccccgtcccccgggttgcgccgcccgccgcccgcccgccgacg
ccagcggcttcgcgtccaaccgggcgaaccccgggcggaccgcggatcgaggatggtggc
cccaatgacgaaccgccgacccaggccgaaagccaaagggccgcgtcgtttctcgccgcc
caggcgggctcgctcgaggacctgcgaaccgcgctcgattccttccgctcctgcgccctg
cgccgcaccgcgacgcaaacggtctttgccgacggttgtccccaatcggggatgatgatc
atcggcgaggcccccggggccgacgaggatcggctgggacgacccttcgtcggcgtctcg
ggcaagctgcttgatgccatgctgggctcgatcggtcttgatcgcgccgacagttgctac
atcaccaacgtcgtgccctggcgcccgcccggcaaccgcaagcccaccgccgacgaggtg
gcgctgtgcctgccctttctcgaacgccatatcgccctggtccgcccccggctgatcctg
gcggtgggcgggctggccgcccaggcgctgtttgggcggagcgagggcatcacccgccta
cgcggccactggcatgactatgagggccccgggcttgaccggtcggtgcccgtcctcgcc
accttccaccctgcctatctgctgcgcaccccggcgcaaaagcgcttggcttggcgcgac
ctgctggcgctgcgccagcggctcgatagcctgcccagcctgtcataa
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