KEGG   Rhodospirillum rubrum F11: F11_01345
Entry
F11_01345         CDS       T02006                                 
Name
(GenBank) phage SPO1 DNA polymerase-like protein
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
rrf  Rhodospirillum rubrum F11
Pathway
rrf03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rrf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    F11_01345
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rrf03400]
    F11_01345
Enzymes [BR:rrf01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     F11_01345
DNA repair and recombination proteins [BR:rrf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     F11_01345
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AEO46739
LinkDB
Position
330933..331880
AA seq 315 aa
MSTDALPPPPARQAGPLSAPGSFLGQGGEEGHGFDLAGLLGWYLEAGVDLAVGDSPLDRY
ALSERAPVPRVAPPAARPPTPAASRPTGRTPGGPRIEDGGPNDEPPTQAESQRAASFLAA
QAGSLEDLRTALDSFRSCALRRTATQTVFADGCPQSGMMIIGEAPGADEDRLGRPFVGVS
GKLLDAMLGSIGLDRADSCYITNVVPWRPPGNRKPTADEVALCLPFLERHIALVRPRLIL
AVGGLAAQALFGRSEGITRLRGHWHDYEGPGLDRSVPVLATFHPAYLLRTPAQKRLAWRD
LLALRQRLDSLPSLS
NT seq 948 nt   +upstreamnt  +downstreamnt
atgagcaccgacgcccttcccccgccgccggcccgacaggccggcccgctttccgctccc
ggttcgttcctcggccaggggggcgaagaggggcatggctttgatctcgccgggcttctt
ggctggtatcttgaagccggggtggatctggcggtgggtgacagcccgcttgaccgctat
gccctgagcgaacgcgcccccgtcccccgggttgcgccgcccgccgcccgcccgccgacg
ccagcggcttcgcgtccaaccgggcgaaccccgggcggaccgcggatcgaggatggtggc
cccaatgacgaaccgccgacccaggccgaaagccaaagggccgcgtcgtttctcgccgcc
caggcgggctcgctcgaggacctgcgaaccgcgctcgattccttccgctcctgcgccctg
cgccgcaccgcgacgcaaacggtctttgccgacggttgtccccaatcggggatgatgatc
atcggcgaggcccccggggccgacgaggatcggctgggacgacccttcgtcggcgtctcg
ggcaagctgcttgatgccatgctgggctcgatcggtcttgatcgcgccgacagttgctac
atcaccaacgtcgtgccctggcgcccgcccggcaaccgcaagcccaccgccgacgaggtg
gcgctgtgcctgccctttctcgaacgccatatcgccctggtccgcccccggctgatcctg
gcggtgggcgggctggccgcccaggcgctgtttgggcggagcgagggcatcacccgccta
cgcggccactggcatgactatgagggccccgggcttgaccggtcggtgcccgtcctcgcc
accttccaccctgcctatctgctgcgcaccccggcgcaaaagcgcttggcttggcgcgac
ctgctggcgctgcgccagcggctcgatagcctgcccagcctgtcataa

DBGET integrated database retrieval system