Rhodospirillum rubrum F11: F11_01645
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Entry
F11_01645 CDS
T02006
Name
(GenBank) NifA subfamily transcriptional regulator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
rrf
Rhodospirillum rubrum F11
Brite
KEGG Orthology (KO) [BR:
rrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rrf03000
]
F11_01645
Transcription factors [BR:
rrf03000
]
Prokaryotic type
Helix-turn-helix
Other families
F11_01645
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
GAF_2
GAF
Sigma54_activ_2
GAF_3
AAA_5
Mg_chelatase
HTH_8
AAA
AAA_2
AAA_19
MCM
HTH_50
AAA_7
AAA_3
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AEO46799
LinkDB
All DBs
Position
396246..398447
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AA seq
733 aa
AA seq
DB search
MGEAHSLAERYELLLDVSEILELNRDLNSLLGALCDLPASIGLFDYVNLLLYDAPTDTMT
LFSQGDVGGGYARIDGLAPTEGPGQVVWARQRPFVCSGEEYRRHFLKIAALRRNQRVGLY
CQMPLTTSQRRLGGVEFISSRPTTYDEDDLTFLRRVASVIAISVENALIGEMRQMEEERL
RGERDHNHILVEVTNAVISKLKLEDLVDEVSRSIHRFFGVDFVSLDLVDPATATIKSRSV
YFQKGLGPVWGSAQGPLGASPMAPLFETKAPRILARADLGALARGHDQMTLLTNAGFQVA
CGIPLLSAGHVLGVLTLASRERDKFTDYNIGLLGEVASRICIAVENALAYGEISRLKDQL
SRENKQLAKERYYLEEEIRRTEDFGDIIGISPAIRGVLEQVELVADSDSTVLILGETGTG
KELIARAIHMLSQRKKRTMIKVNCAAIPSALLESDLFGHEKGAFTGAIAQKSGRFELADR
GTLFLDEVGDIPIDLQPKLLRALQEREIERVGGHQPIPVDVRMIAATNRDLTGMVEKRLF
RGDLYYRLNVFPILIPPLRERREDIPLMADYFMRKTARKMNRAIEAFSAETMDMLLNLPW
PGNVRELQNVIERAVILTKGPVLHLPATELRHHLAPSAALPSEDAVIPLRAAVLPSAASA
PDPLPPPAGSSPNPGDLAGEAIERDQILRVLRETNGIVGGPRGAAAHLGMKRTTLLSRMR
RLGISPKEVDHRA
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaggcgcacagtctggcggaacgctacgaactgttgctcgatgtgtcggagatt
ctcgagctgaaccgcgatctaaattcgctgctcggcgcgctttgcgacctgccggccagc
attggtctgttcgattatgtcaatctgctgctctatgacgcgcccaccgatacgatgacg
ttgttttcgcagggcgatgtcggcggcggctatgcgcggatcgacggtctcgccccgacc
gagggaccggggcaggtggtctgggcccgtcaacgtcccttcgtgtgcagcggcgaggaa
taccgccggcatttcctgaagatcgccgctctgcgccgcaaccagcgggtcggactgtat
tgtcagatgccgctgaccaccagccagcgccggctgggcggggtggaattcatcagttca
cgccccactacctatgacgaggatgatctgaccttcctgcgccgggtcgcctcggtcatc
gccatttcggttgaaaacgccctgatcggcgaaatgcgccagatggaggaggagcgtctg
cgcggcgaacgcgatcacaaccacattctggtcgaggtgaccaatgcggtgatttccaag
ctgaagctggaggatctggtcgacgaggtgtcgcgctccattcaccggtttttcggcgtc
gatttcgtctccctcgatctggtcgatccggccaccgccaccatcaaatcgcgctcggtc
tatttccagaaggggttggggccggtctggggctcggcccaggggccgcttggcgcctcg
ccgatggcacccttgttcgagaccaaggcgccgcgcatcctggcccgcgccgatctgggg
gccctggcgcgcggccatgatcagatgaccttgctgaccaacgccggtttccaagtggct
tgcggtatcccgttgctttcggcggggcatgttctgggggtgctgaccctggccagccgc
gagcgcgacaagttcaccgattacaatatcggcttgctgggcgaggtcgcctcgcgcatt
tgcatcgccgtggaaaacgccctggcttacggcgagatttcccggctcaaggaccagttg
tcgcgcgagaacaagcaactggccaaggaacgctattacctggaagaggaaatccgccgc
accgaggatttcggcgatatcatcggcatcagcccggccattcgcggcgttctcgaacag
gtggagctggtcgccgacagcgacagcacggtgctgatcctcggcgagacgggcacgggc
aaggaactgatcgcgcgcgccatccatatgctgagccagcgcaagaagcgcacgatgatc
aaggtgaactgcgcggccattccctcggccctgctggaaagcgatctgttcggccatgaa
aaaggcgccttcaccggcgccatcgcccagaagtccggccgcttcgaactggccgatcgc
ggcacgctgtttcttgacgaggtcggcgacatccccatcgatctgcagcccaaactgctg
cgcgccttgcaggagcgcgaaatcgagcgggtcggcggacatcagccgatcccagtggat
gtgcggatgatcgccgccaccaaccgcgacctgacgggcatggtcgagaagcggctgttc
cggggcgatctgtattatcgcctgaacgtctttccgattctgatcccgcctttgcgcgag
cgccgcgaggatattccgctgatggcggattatttcatgcgcaagacggcgcgcaagatg
aaccgggcgatcgaggccttctcggccgaaaccatggatatgctgcttaacttgccgtgg
ccgggcaatgtgcgcgagctgcaaaacgtcatcgagcgcgcggtcatcctgaccaagggg
ccggtgctgcatctgcccgccaccgaactgcgccatcatctggcgcccagcgccgccctg
ccgtccgaagacgcggtgattcctctccgcgccgcggtgctgccctccgccgcgagcgcg
cccgatccgctcccgcccccggccgggtcgtcccccaatcccggcgatctcgccggcgag
gcgatcgagcgcgaccagatcttgcgagtattgcgcgaaaccaatggcatcgtcggtggt
ccgcgcggcgcggcggcccatctcggaatgaagcggaccaccttgctgtcgcggatgcgc
cgccttggcatctcgcccaaggaggtcgatcaccgcgcgtga
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