Rhodospirillum rubrum F11: F11_02080
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Entry
F11_02080 CDS
T02006
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
rrf
Rhodospirillum rubrum F11
Brite
KEGG Orthology (KO) [BR:
rrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrf03400
]
F11_02080
DNA repair and recombination proteins [BR:
rrf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
F11_02080
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
RecA_N
DUF7125
AAA_16
SLFN-g3_helicase
AAA_22
DnaB_C
AAA_24
nSTAND_NTPase5
nSTAND3
AAA
GvpD_P-loop
NTPase_1
Zn_ribbon_Nudix
ADK_lid
ABC_tran
PAXNEB
MCM
NACHT
DZR
DAP3
Motif
Other DBs
NCBI-ProteinID:
AEO46886
LinkDB
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Position
complement(482981..484390)
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AA seq
469 aa
AA seq
DB search
MAKNAPRFVCQACGAVYPRWMGRCEACGEWNSIAEEAPAEALPKGQTGGRGGQRLSFVSL
EGVGAPPPRLLTGIPELDRVAGGGLVAGSALLIGGDPGIGKSTLLLQAVAGLARGGARSV
YISGEEAIDQVRLRALRLGLEKAPVDLAAATSVRDIVATLDSGEPPDVVVIDSIQTMYLD
TLDSAPGTVAQVRAGSHELIRLAKRRGFVLFLVGHVTKEGQMAGPRVMEHMVDAVIYFEG
ERGHPFRILRAVKNRFGATDEIGVFEMSDAGLSEVPNPSALFLAERRGNVTGSCVFAGME
GTRPMLVEIQALVGPSAPGSARRAVVGWDGGRLAMVMAVLETRCGLALGGNDVYLNVAGG
LRIGEPAADLAVAAALVSSFSGVPVPPDMVVFGEIGLSGEIRAVAHGDTRLKEAAKLGFD
QALMPARPRDSGKRGGPGVKEGLRMREIGHLQDLVALLAPPENAGQGQR
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaacgccccccgcttcgtctgtcaggcttgcggcgcggtctatccgcgttgg
atgggccgctgcgaggcctgcggtgaatggaactcgatcgccgaggaggccccggccgag
gccctgcccaagggtcagaccggcggccgcggcggccagcggctctccttcgtcagcctg
gaaggggtgggcgcgccgcccccccggctgctgaccggcatccccgagcttgaccgggtg
gccggcggcggtctggtcgccggctcggccctgctgatcggcggcgatccgggcatcggc
aaatcaaccctgttgttgcaggcggtggccggtctggcgcgcggcggggcgcgctcggtt
tatatctcgggcgaagaggcgatcgatcaggtccggctgcgcgccctgcgcctgggcttg
gaaaaggccccggttgatctggcggcggcgaccagcgtgcgcgacatcgtcgccaccctt
gatagcggcgagccccccgatgtcgtggtcatcgattcgatccagaccatgtatctcgat
accctcgactcggcgccgggcacggtcgcccaggtccgcgccgggtcccatgaattgatc
cgtctggccaagcgccggggcttcgtgctgtttctcgttggtcatgtcaccaaggaaggc
cagatggccggtccccgggtgatggagcatatggtcgacgccgtcatctatttcgaaggc
gagcgcggccatcccttccgcattttgcgcgcggtgaagaaccgcttcggcgccaccgac
gagatcggcgttttcgagatgtccgacgccggattgtcggaggttcccaatccctcggcg
ctgttcctggccgagcggcggggcaatgtgacggggtcttgcgtgttcgccggcatggag
ggcacgcggccgatgctggtcgagatccaggccctggtcggcccctcggcccccggatcg
gcgcggcgcgccgtcgtcggctgggatggcggccgtctggcgatggtgatggccgtgctt
gaaacccgctgtggtcttgcgctgggcggcaatgacgtttatttgaacgttgccggcggc
ctgcgcatcggcgagccggccgccgatctggcggtggcggcggcgctggtttcgtcgttc
tccggggttcccgtgccgcccgatatggtggttttcggcgagatcgggctttcgggggag
atcagggcggtggcccatggcgatacgcggctcaaggaagccgccaaactcggtttcgat
caggccttgatgccggcccggccgcgcgatagcggcaaacggggcggccctggcgtgaag
gaaggattacgaatgcgcgaaatcggccatttgcaggatctggtggcgctgctggcgccc
ccggaaaatgccggccaggggcagcggtga
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