Rhodospirillum rubrum F11: F11_04030
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Entry
F11_04030 CDS
T02006
Name
(GenBank) cystathionine gamma-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
rrf
Rhodospirillum rubrum F11
Pathway
rrf00260
Glycine, serine and threonine metabolism
rrf00270
Cysteine and methionine metabolism
rrf00450
Selenocompound metabolism
rrf00670
One carbon pool by folate
rrf01100
Metabolic pathways
rrf01110
Biosynthesis of secondary metabolites
rrf01230
Biosynthesis of amino acids
Module
rrf_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
rrf00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
F11_04030
00270 Cysteine and methionine metabolism
F11_04030
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
F11_04030
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
F11_04030
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rrf04147
]
F11_04030
Enzymes [BR:
rrf01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
F11_04030
Exosome [BR:
rrf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
F11_04030
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
DegT_DnrJ_EryC1
Beta_elim_lyase
ADH_zinc_N_2
Motif
Other DBs
NCBI-ProteinID:
AEO47276
LinkDB
All DBs
Position
complement(938426..939598)
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AA seq
390 aa
AA seq
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MSASIITTTKGFATWAVHAGHGADATTGAVMTPIYATSTFAQSSPGKHTGWEYARSGNPT
RAAFERAVAELEGGTNGYAFASGLAAEATILDLLDHGAHIIAGDDLYGGSWRLFEKVRAR
SAGLTVSYVDPSDLGAVAQAITPQTKLIWIETPSNPLLKIADLAALAALAKEHGLRTVVD
STFATPWIQRPLDLGIDIVVHSATKYLNGHSDVIAGVVVVKDPDLASQLGFLQNATGAVL
DPFAAFLALRGLKTLALRMDRHSANGLAVAHALEGRAKVRRVLYPGLASHPQHALARQQM
RAFGGMLTLDLESDLAGTVRFLEALKLFTLAESLGGVESLAGHPVTMSHGSIPVERRTAL
GITDTLVRLSVGIEDAGDLIADLDQALAVV
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgtccatcatcaccaccaccaagggcttcgccacctgggccgtccacgccggc
catggcgccgatgcgaccaccggcgcggtcatgacgccgatctacgccacctcaaccttc
gcccaatcctcgccgggcaagcatacggggtgggaatacgctcgctcgggcaatccgacc
cgcgccgcctttgaacgcgccgtcgccgaattggaaggcggcaccaacggctatgccttc
gcctccggcctcgccgccgaggcgaccattctcgatctgctcgaccacggcgcccatatc
atcgccggcgacgacctgtacggcggatcctggcgattgtttgaaaaggtgcgggcgcgc
tcggccggcttgacggtcagctatgtcgatcccagcgaccttggcgccgtggcccaggcg
atcaccccgcagaccaagctgatctggatcgaaacgccaagcaatccgctgctcaagatc
gccgacctcgcggctttggccgccttggccaaggagcatggcctgcgcacggtggtcgat
tcgaccttcgccacgccgtggatccagcgcccccttgatcttggcatcgatatcgtcgtc
cattcggcgaccaaatacctgaacggtcattccgacgtgatcgccggggtggtggtggtc
aaggatcccgatctcgccagccagttgggcttcctgcaaaacgccaccggcgccgtgctc
gatcccttcgccgccttcctggccctgcgcggcctgaagaccctggccctgcgcatggac
cgccattcggccaatggcttggccgtcgcccatgccctggaaggccgggccaaggttcgc
cgcgtgctttatcccggcctcgccagccacccccagcacgcactggcccgccagcagatg
cgcgccttcggcggcatgctcaccctggatctcgagagcgatctggccggaaccgtgcgc
ttcctggaagccttgaaactgttcaccctggccgaaagcctgggcggcgtggaaagccta
gccggccatccggtgaccatgagccacggatcgatcccggtcgaacgccggacggccctt
ggcatcaccgacaccctggtccgcctgtcggtcggcatcgaagacgccggcgatctgatc
gccgatctcgatcaggcgctggccgtcgtctga
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