KEGG   Rhodospirillum rubrum F11: F11_04280
Entry
F11_04280         CDS       T02006                                 
Name
(GenBank) CRISPR-associated RAMP Csd1 family protein
  KO
K19117  CRISPR-associated protein Csd1
Organism
rrf  Rhodospirillum rubrum F11
Brite
KEGG Orthology (KO) [BR:rrf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rrf02048]
    F11_04280
Prokaryotic defense system [BR:rrf02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    F11_04280
SSDB
Motif
Pfam: Cas_Csd1
Other DBs
NCBI-ProteinID: AEO47326
LinkDB
Position
984363..986186
AA seq 607 aa
MSLLAALTRAYDRLAERHEVPAFGYSTQNIGFLISLTDDGALAGPPIDLRQGAGKKRVGR
PMAVPLPVKRTSGIAPNFLWDKTSYVLGVSAGAGKRLAEEHAAFVTSHQSALVGSEDPGL
RALLTFLQAWTPDHFDTLGWPEEMKDQNVIFALESERLRDVYLHDREAARSLWARQLAAT
DRPRAVCLVSGEKAPIARLHPAIKGVWGGQSSGVSLISYNKESFDSYGHEQGDNAPVSEV
VASAYTAVLNQFLASDSGHRIQIGDASTVFWADASDAETASLAENSFLAMIDSIDEDKQA
GEVGAILEKMRTGMALSDAAPRLAEGVRFYVLGLAPNAARVSVRFWFEDDFGVLAKNYQR
YAEETRIEPSLRDAYPPLWKVLLETAVLGKRENVPPNLAGAYLRAILTGTRYPQTLLSTL
LMRLRSDKTVSPLRVALLRALLIRNLACKEAPVALDPENTNKGYLLGRLFAVYEDIQRAA
LGYHVNATIKDKFYGSASAQPRRIFKILANGAANHLSKIGKDKPGLKNTLEGAITAITEV
LSPGEDPFPVAFSTEQQALFGLGYYHQYADISRRRAEAIQRAKEKKAKEKAAASAAENAS
ATEETAQ
NT seq 1824 nt   +upstreamnt  +downstreamnt
atgagcctccttgccgcgctgacccgcgcctatgaccgccttgccgagcgccacgaggtt
cccgccttcggttattccacccaaaatataggtttcctgatttccctgactgacgacggc
gccctcgccgggccgccgattgatttgcgccagggtgctgggaaaaagcgggtagggcgg
ccgatggcggtgccgctgccggtcaaacgcacctcggggatcgcgcccaatttcctgtgg
gacaagacctcctatgtccttggcgtctccgccggagcgggcaagcgccttgccgaggaa
cacgcggccttcgtcacctctcaccaaagcgctttggtcggcagcgaagatccgggcctg
agggctttgctgacctttcttcaggcctggacccccgatcatttcgacaccctgggctgg
cccgaggagatgaaggaccagaatgtcatcttcgccctggaaagcgagcggctgcgcgac
gtttatctccacgatagggaggcggcgcggagcctgtgggcgcggcagttggcggcgacg
gatcgcccccgagcggtttgtctggtcagcggtgaaaaagcgccgatcgcccgtttgcat
cccgccatcaaaggggtatgggggggccaatcctcgggcgtatcgctgatctcttataac
aaggagtcctttgactcctatggacacgagcagggcgataacgctccggtgtcggaggtc
gtggcctccgcctataccgccgtgctcaaccagtttctggcatctgatagtggtcatcgc
atccagatcggcgacgcctcgacggtgttttgggccgatgcctctgacgccgaaaccgcc
agccttgccgaaaactccttcctggccatgatcgacagcatcgatgaagacaagcaggcg
ggcgaggtcggggcgatcttggaaaagatgcgtacgggcatggcgctaagcgatgccgcg
ccacgcctagccgagggcgtgaggttttatgttctggggttggcgcccaacgcggcgcgg
gtgtcggtgcgcttttggttcgaagacgacttcggtgttctggcaaaaaactaccagcgc
tatgccgaggaaacccgtatcgagccgtcgctgcgcgatgcttatccgccgctgtggaag
gtcttgctggaaaccgccgtattgggcaaacgcgagaacgtgccgcccaatctggccggg
gcttatctgcgggctattctcaccggcacgcggtatccgcaaacgctgctctcgaccctt
ctgatgcgcctgcgcagcgataaaaccgtctcgccgctgcgcgtcgccctgctcagggcc
ctgttgatccgaaatctggcttgcaaggaggctcccgtggcgcttgacccggagaatacc
aataagggctatctgcttggccgcttgttcgcggtttacgaagatatccaaagggcggct
ttggggtatcacgtcaatgcgacgatcaaggacaagttctatggctccgcctcggcccag
ccacgccgcatattcaaaatacttgccaacggggcggccaatcatctctccaagatcggt
aaggacaagcccggtttgaagaataccttggagggagcaatcaccgcgattacggaagtg
ctttctccaggggaagatccttttcctgtcgcgttctcgaccgagcagcaggctttgttt
ggtcttggttattaccatcaatacgcggacataagccgcaggcgcgccgaggcgattcag
agagccaaagaaaaaaaggccaaagaaaaagccgccgcgtccgccgccgaaaacgcctcc
gcaaccgaggaaacagcccaatga

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