Rhodospirillum rubrum F11: F11_04905
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Entry
F11_04905 CDS
T02006
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rrf
Rhodospirillum rubrum F11
Pathway
rrf00470
D-Amino acid metabolism
rrf00550
Peptidoglycan biosynthesis
rrf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rrf00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
F11_04905 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
F11_04905 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rrf01011
]
F11_04905 (murD)
Enzymes [BR:
rrf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
F11_04905 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rrf01011
]
Precursor biosynthesis
Amino acid ligase
F11_04905 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
AEO47451
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All DBs
Position
complement(1135925..1137307)
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AA seq
460 aa
AA seq
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MGLGKSGMATARALAGTGTRVHAWDDSPILRDAARAESVPLCDLTDQTSRTSPWPALQGV
VWSPGIPHTFPQPHPVAVIAHERGVPLFCDIDLLARARQDCFFLGITGTNGKSTTTALIG
HILKAARHPVQVGGNLGTPALSFEPLPFHGTYVLELSSYQLELVPSLCCDVAVLLNITPD
HLARHGGMDGYIAAKRQIFRCGPRPGVAVVCIDDEPSLAIHDALCRENGRKVVAVSTRAL
PRGGVGAVDGQLVDATQGRPRAVADLTTIATLPGAHNWQNAAAAYAACRQHGIDAKIIVE
AMASFPGLPHRQELVAEIDGVRFINDSKATNADAADKALRCYDTVYWIAGGQPKEGGIVS
LEPHFHRMRQAYLIGQAAPAFERTLKGKVPLSQVGTLTRAVTEAAKAAWRDAIPGAVVLL
SPACASWDQFSSFEHRGDIFRELVADLAHTRAAAKPGGRR
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgggcaaatcgggaatggccacggcgcgggcgctggcgggcacgggaacgcgc
gtccacgcctgggacgacagcccgatcctgcgtgacgccgcccgcgccgagtccgttccg
ctgtgcgacctcaccgaccagaccagccgcacgtccccctggccggcgctgcagggcgtg
gtgtggagcccgggcattccccacaccttcccccagccccatccggtggcggtgatcgcc
cacgagcgcggcgtgccgctgttttgcgacatcgacctgctggcccgcgcccgccaggac
tgcttcttcctgggcatcaccggcaccaacggcaaatcgacgaccacggcgctgatcggc
catatcctgaaggcggcccgccacccggtgcaggtcggcggcaatctcggcaccccggcg
ctgtcgttcgagcccctgcccttccatggcacctatgtgctggagctgtcgtcctatcag
ctcgaactggtgccctcgctgtgctgcgacgtggcggtgctgctcaacatcacccccgat
catctggcccgccatggcggcatggacggctatatcgccgccaagcgtcagatcttccgc
tgcggtccgcgcccgggcgtcgccgtcgtctgcatcgacgacgagccgtcgctggccatc
catgacgcgctgtgccgcgagaacggtcgcaaggtggtggcggtctccacccgcgccctg
ccgcgcggcggcgttggcgccgtcgacggccagttggtcgacgccacccagggccggccg
cgcgccgtcgccgatctgacgacgatcgccaccctgcccggcgcccacaactggcaaaac
gccgccgccgcctatgccgcctgccgccagcatgggatcgacgccaagatcatcgtcgag
gcgatggccagcttccccggcctgccccaccgccaggaactggtggccgagatcgacggc
gtgcgcttcatcaacgacagcaaggcgaccaatgccgacgccgccgacaaggcgctgcgc
tgctatgacacggtttattggatcgccggcggccagcccaaggaaggcggcatcgtcagc
ctcgagccgcatttccaccgcatgcgccaggcctatctgatcggtcaggccgccccggcc
tttgagcgcaccctgaagggcaaggttcccctgtcccaggtcggcaccctgacccgcgcc
gtcaccgaagccgccaaggccgcctggcgcgacgccatccccggcgccgtcgttttgctg
tcgccggcctgcgcctcgtgggatcagttctccagcttcgagcatcgcggcgacatcttc
cgcgaactcgtcgccgatctcgcccatacccgggccgccgccaagccggggggccgccga
tga
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