Rhodospirillum rubrum F11: F11_05890
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Entry
F11_05890 CDS
T02006
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rrf
Rhodospirillum rubrum F11
Pathway
rrf00260
Glycine, serine and threonine metabolism
rrf00460
Cyanoamino acid metabolism
rrf00630
Glyoxylate and dicarboxylate metabolism
rrf00670
One carbon pool by folate
rrf00680
Methane metabolism
rrf01100
Metabolic pathways
rrf01110
Biosynthesis of secondary metabolites
rrf01120
Microbial metabolism in diverse environments
rrf01200
Carbon metabolism
rrf01230
Biosynthesis of amino acids
rrf01240
Biosynthesis of cofactors
rrf04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rrf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
F11_05890
09102 Energy metabolism
00680 Methane metabolism
F11_05890
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
F11_05890
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
F11_05890
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
F11_05890
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
F11_05890
Enzymes [BR:
rrf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
F11_05890
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AEO47648
LinkDB
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Position
complement(1347656..1348960)
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AA seq
434 aa
AA seq
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MEASVAPPALRNAPCAGVNAACLSAADDAVAIAIAQETTRQRESIELIASENFVSKAVLE
AQGSVLTNKYAEGYPQRRYYGGCANVDRVEDLAIARLNQLFGSTYANVQPHSGSQANQAV
FLALLAPGDTILGLDLKAGGHLTHGAPVNISGRWFTAVSYGVDPRTHLIDMEQMADLARR
HRPKLLIAGGSAYPRLLDFARFRQIADEVGAILMVDMAHFAGLVAGGVYPSPVPFADVIT
STTHKTLRGPRGGFVLTNDAAIAKKINSAVFPGLQGGPLMHIIAAKAVAFGEALDPSFKI
YARRVVENCRVLAQTLLDGGLAITSGGTDCHLAVVDLRPLGVTGTIAEQALESIGITLNK
NAIPNDPEKPMVTSGIRVGSAAGTSRGFGPEEYRRIAALILETLHAVRAGTLEADREGIR
TRVRSLVAGFPLPY
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggaagcatcggtcgcgccccccgcactccggaacgccccctgcgcaggcgtcaacgcc
gcctgtttgtccgccgccgatgacgccgttgccatcgccatcgcccaggagacgacacgc
cagcgcgagtccatcgagttgatcgcctcggagaactttgtgagcaaggcggtgctcgag
gcgcaggggtccgtgctcaccaacaaatatgccgagggctatccgcagcgccgctattat
ggcggatgcgcgaacgtcgatagggtcgaggatctggcgatcgcccgcctcaaccagctt
ttcggcagcacctacgccaacgtccagccccattcgggcagccaagccaatcaggcggtc
tttttggcgcttctcgcccccggtgacaccatcctggggctcgaccttaaggccggcggc
catctcacccatggcgccccggtcaatatctccggccgttggttcacggccgtcagctat
ggcgtggacccgcgaacccatctcatcgacatggagcagatggcggaccttgcccgccgg
caccggccgaagctgctgatcgccggcgggtcggcctatccgcgcctcctggactttgcg
cgcttccgccagatcgccgacgaggtgggggcgatcttgatggtcgatatggcgcatttc
gccgggttggtcgctggcggggtgtatccgtcgccggtgcccttcgctgatgtcatcacc
tcgaccacgcacaagacgctgcgcgggccgcggggcgggttcgtcctgaccaatgacgcc
gcgatcgccaagaagatcaactcggcggtctttcccggcctgcaaggcggtccgctcatg
cacatcatcgcggccaaggccgtggcgtttggcgaggcgctcgatccctcgttcaagatc
tatgcgcggcgtgtcgtcgagaattgccgcgttctcgcccaaacgctcctcgacggcgga
ctggcgatcaccagtggcgggaccgactgccatctggcggtggtcgatctgcgccccctt
ggtgtcaccggtaccatcgccgaacaggccctggaatcgatcggcatcaccctcaacaag
aatgcgatccccaacgatcccgaaaagccgatggtgacctcgggcatccgggtcggcagc
gcggcgggaacctcgcgcgggtttggacccgaggagtatcggcggatcgccgcgttgatc
ctcgagacgctgcacgctgtgcgcgccgggacgctcgaggccgaccgggagggcatccgc
acccgggtgcgcagcctcgtggcgggttttcccctgccttactga
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