Rhodospirillum rubrum F11: F11_06325
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Entry
F11_06325 CDS
T02006
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rrf
Rhodospirillum rubrum F11
Pathway
rrf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rrf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
F11_06325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrf03400
]
F11_06325
Enzymes [BR:
rrf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F11_06325
DNA repair and recombination proteins [BR:
rrf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F11_06325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_16
Zn_ribbon_12
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
AEO47735
LinkDB
All DBs
Position
1441961..1444396
Genome browser
AA seq
811 aa
AA seq
DB search
MAGLPALPPGSRELFPEDAHAEPVVAVLLPLPLAGAYDYKVPAGMARPAVGTLVRVPLGR
REEIGVVWGAGAGETPPERLKPLIGFPECPPLPAPLRAFIDWVAAYTVQPPGAVLRMALS
VPAALEAPPPALGWRRPSAGQRAAGQRAEGQGPLPGGARLSPGRQRVLAVLDDHPGLPFA
GADLAREAAVGPAVVAAMAKAGLLEAVTRSNEWSPQAPDADRPGPLLSADQQAAADGLRT
ALDQGFSGLLLEGVTGSGKTEVYFEAIAETLRRGRQALVLLPEIALAAQWPRRFADRFGA
APVQWHSQMGAAARRRAWRAVALGRAPVVVGARSALFLPYPDLGLIIVDEEHDSAFKQEE
GVPYNARDMAVVRARLGGFPAVLASATPSLETIENARQGRYRHLVLPRRHGGAEMPEITL
LDLRRAPPQKWLPTDFAGPGGSEGLAAPGGANDEAEEQKAPPPSPTASPSPTASPSPMAR
PARLGWLSPPLITAVEETLAAGEQVLLFLNRRGYAPLTLCRSCGHRLKCPRCTAWLVEHR
RDGRLRCHHCGYQQPIPETCPACGVADSLAPCGPGVERLAEEAAHRFPKARMDVAASDTV
TGPKEAAALATRIANHDIDLIIGTQIMAKGHHFPLITLVGVVDGDLGLTGGDLRASERTH
QLLHQVAGRAGRAERPGRVLIQTVDPGHPVMEALASGDPALFLEVEAAERQALAMPPFGR
LVALVISGEDSARVQAVAAALGRAAPMGPGLDVLGPVPAPLAMLRGRHRHRLLLKAARGV
KVQPVVRHWLSLVSIPPGVKVQVDVDPISFL
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggccggtctcccggctttgccccccggttcccgggagcttttccccgaagacgcccac
gccgagcccgtcgtcgccgtgttgctgccgctgcctttggccggggcctatgactataag
gtgcccgccggcatggcccggcccgccgtcggtaccctggtgcgggtgccgctggggcga
cgggaggaaatcggcgtggtttggggggcgggggcgggcgaaaccccgcccgaacgcctg
aagccgctgatcggctttcccgagtgtccgcccctgcccgcgcctttgcgcgcttttatc
gactgggttgcggcttatacggtgcagccgcccggggcggtgttgcgcatggcgctcagc
gtgcccgccgccctggaagcgccgccgccggcccttggctggcgccgtccttcggcgggt
cagcgggcggcgggtcagcgggcggaggggcaggggccgcttccggggggggcgcggctg
agccccggccgccaaagggttctggcggttcttgacgaccatcccggtctgcccttcgcc
ggcgccgatctggcgcgggaagcggccgtggggccggcggtggtggcggcgatggccaag
gccgggctgctcgaggcggtgacccgttcgaatgaatggtcgccgcaagcccccgatgcc
gaccggcccggaccgctgctgtcggccgatcaacaggcggcggcggacggcctgcgcacg
gcgcttgaccagggattttccggtctgttgctggaaggggtcaccggctcgggcaagacc
gaggtctatttcgaggcgatcgccgaaaccctgcgccgcgggcggcaggctctggtgctg
ttgcccgaaatcgccctggccgcccaatggccgcggcgcttcgccgaccgcttcggcgcc
gcgccggtgcaatggcattcgcaaatgggcgcggcggcgcggcggcgggcttggcgggcg
gtggccctggggcgggcgccggtggtggtgggggcgcgatcggcgctgtttctgccctat
cccgatctgggcttgatcatcgtcgatgaagaacacgacagcgccttcaaacaagaggag
ggcgtgccgtataacgcccgcgacatggccgtggtccgcgcccgcctcggcggctttccc
gccgtgctcgcctcggccacgccgtcgctggaaaccatcgagaacgcccgccagggccgc
tatcggcatctggtgctgccccgtcgccacggcggagcggaaatgcccgagatcaccctg
ctcgatctgcgccgcgccccgccgcaaaaatggctgcccacggattttgccggacccggc
gggtccgagggtctggccgcgcccggcggggcgaacgacgaggccgaggagcaaaaagcg
ccccccccttcgcctacggcctccccttcgcctacggcctctccttcgcccatggcccgc
ccggcccgcttgggctggctgagcccgccgctgatcaccgccgtcgaggaaaccctggcg
gcgggcgagcaggttctgctgtttctcaatcgccggggctatgcgccgctgaccctgtgt
cggagctgcggtcatcggctgaaatgcccgcgctgcaccgcttggctggttgaacaccgc
cgcgatgggcgcctgcgctgtcaccattgcggctatcagcagccgatccccgagacctgt
ccggcctgtggggtggccgattccctggcgccttgcggcccgggcgtcgagcgattggcc
gaagaggccgcccatcgctttcctaaggcgcgcatggatgttgccgccagcgatacggtg
accggaccgaaagaggccgccgccctggcgacacgaatcgccaatcacgacatcgatctg
atcatcggcacccagatcatggccaagggccaccactttccgctgatcaccctggtcggc
gtcgtcgatggcgatttggggctaaccggcggcgatctgcgggcttcggaacgaacccac
cagctgctccatcaggtcgcgggccgggccgggcgggccgagcggccggggcgggtgctg
atccagaccgtcgatcccggccatccggtgatggaggccctggcctcgggcgatccggcg
ctgtttctcgaggtcgaggcggccgagcgtcaggccctggcgatgccccccttcggccgg
ctggtcgccctggtgatctcgggcgaggactctgcccgggtccaggccgtggccgcggcc
cttgggcgggcggcgccgatggggcctggccttgatgtgctggggcccgtacccgcgccg
cttgcaatgttgcgtggacgccaccgacacaggctgttgctcaaggcggcgcggggggta
aaggtgcaaccggtggtgcgccactggctatcgctcgtatcgattccgcccggggtgaag
gttcaggtggacgtggaccccatttcctttctatag
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