Rhodospirillum rubrum F11: F11_06650
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Entry
F11_06650 CDS
T02006
Name
(GenBank) WD-40 repeat-containing protein
Organism
rrf
Rhodospirillum rubrum F11
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
nSTAND1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Ge1_WD40
PD40
Beta-prop_NWD2_C
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Cytochrom_D1
Beta-prop_WDR75_1st
Beta-prop_NUP159_NUP214
Beta-prop_Nup120_160
DUF7165
Trypsin_2
nSTAND3
AAA_16
RsgA_GTPase
AAA_25
ABC_tran
PhoH
AAA_30
Pertussis_S2S3
AAA_29
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEO47800
LinkDB
All DBs
Position
1512945..1517420
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AA seq
1491 aa
AA seq
DB search
MMDPLQGCLLRLLRSDGESDIIVGTGFLSLGADGRPYVLTCAHVVNAALGRDKTETSHPG
SCVVMANQQGGKPIPLDLQAWNAPISGASGNSDIADIAILTPLQSLSASWLPRLRAEPPS
RVVPHNSKVPFHSFGFMVTSDGNPARGSLTAVDFANRFVAHGDHTFRRFIEEGLSGAPVF
SDDSRVLGMVARRLAVEDKQGLVISAFALAQAWPLLAMPYPGLPSFEASNAHLFFGRGRP
VNGEVPTGKLKELLERLQKQRLVALVGASGSGKSSLANAGVAEYYRQRNWRVVSFRPGLA
PLRNLSEAIFEVIEEGETVLSRLQTVSYWESLLKRGMLRDAFDCINRAGADGTLVIVDQF
EEFFPGREASSYDNGDLSVDLDPIAQERSLILKQLRQAEDRADVHCLLTVRLDLLESIIK
GGKDAARLLSDPYPIFMLTAMTASEVREAIVGPAQVFGVETDTNFATNLAAEVTKGEGRL
PLLQEALRQCWARIRFGEQGWNLYQPEDLSEGKEILLLEESVGRRGDEAMGEIERHYKPV
EVNRMLLSLVRWVDGRPLRRILSMMESDESDVPMIAMLANQRLVILSGDGSRRTAELVHE
ALMTRWARLASLISNHHVFLEWRDRFDREFIVWERGRCEEKDLLRRHDVQLAMSWKENVD
GFFIAPTSRQLKFIDESYLFYEKEEIRREEDFRQKEKQNRRIRKWLLLSIFALFLFFIFL
CLSIFTFKKAQDETYSAQMQESRALAVLARQESEKGDQGTAILLALEGLPDPGFGGKRPL
SPEAATMLRQAWLRNREVTTVGYDGPVRVASLSSDGQRVVVASDDEIVRVWDLSAPKSPG
INLGEHQGSVFSANLSPDGQRAVTASYDGIVLVWDLSAPKFPAITLAGSSGSVLSGRESV
SFSPDGQRVLKTSEDGTAQVWDLSSSKIQAITLGERGHYVQSASFSPDGRRVVTASSDGA
AQVWDLSAPKTQAILLEGHEQPVQSASFSPDGQKVVTVSSDGTARVWNLSEPKPQALLLD
GHKGLVQLASFSPDGQHVVTASGDTARVWDLSAPKSQAFLLEGHEGSIQSASFSPDGRRV
VTGSGEGTVRVWDLSAPKSQPILLRGHLRATFFARFSADGRSVVTASYDGTARVWAVPAV
EPGELFLEGSDDSVRSASFSPDGEHLVTISDDKTVRVWDLSVPKPRSLLLEGYEGSVQSA
SFSPDGQRLVTVSDDKTARVWDLAEPKAKALILEGDDASVGSASFSPDGRRVVTASYDKT
ARVWDLSALKPRAITLESSLGWVGSANFSPDGQRVVGASYGGAQIWDLSVPERPKLCMRL
KQLNAGLLQSASFSPDGGRVVTVSDGGTRVVDLSTPKSPPITLGGRLDRARSASFSPDGQ
RVLTASYDGTARVWDLAGSQASALVLGEYSSSMLYANFSRDGRRVLTFSSPNKLRVWDVY
PDIRELSSLVRKRLTRCLSTAQREEFGLRVEDRKRNRDAIPIPDSEGNCPR
NT seq
4476 nt
NT seq
+upstream
nt +downstream
nt
atgatggatccactgcaagggtgcttgctgcgcctgctgcgttcagatggtgaaagcgat
atcatcgttggtactggttttttatcccttggtgctgatgggcggccttatgtcttgacg
tgcgcccatgttgtgaacgctgctttagggcgggacaaaacggagacaagccacccgggt
tcatgcgttgtgatggcaaatcagcaagggggaaagccaattcccttggatttgcaggcg
tggaacgcgccaatttccggggcttctgggaactctgatatcgcggatatcgccatcctg
acgccgcttcaatccctgagtgcgtcctggctcccaagactgcgagccgaaccgcctagt
cgggtggtgccgcataatagtaaagttccattccatagctttggcttcatggtaacctcc
gatggaaatccggcccgaggatctctgactgccgttgatttcgcgaatcggtttgttgcg
cacggtgaccacaccttccgccgttttattgaggaaggattaagtggggcgcctgttttc
tcagacgatagtcgtgtccttggcatggtggcgcgccggcttgcggtcgaagacaaacaa
ggcttggtgatttccgccttcgccttagcgcaagcttggccgctgctggctatgccttat
ccgggattaccttcctttgaggcgtctaacgcccatcttttttttggccgagggcgtcct
gtaaacggggaggttccgactggcaagctgaaggagttgctggagcgcctacaaaagcag
cgtctcgtggcgcttgttggtgcatccggtagtggtaaatcatcgctagctaatgccggg
gtggcagaatattatcgtcaacgtaattggcgcgttgttagctttcggcctggtctcgcg
ccattgcgcaatctttctgaagccatttttgaagtaatagaagaaggagagaccgtctta
tcgagactacagaccgtaagctattgggagagtctcctgaaaagaggcatgctgagggat
gcctttgactgtataaatagagctggggccgatggcactctggttatcgtggatcaattt
gaagagtttttcccaggacgagaagcctcttcttatgataatggcgatctttccgttgac
ttagatcctatagcccaggaaaggtcgttgattctgaagcaattgcgtcaagctgaggat
cgtgctgatgtgcactgtcttctgacagtgcgccttgatctattggaatccataattaaa
ggaggaaaagacgcggccagattgttatctgatccttatccaatctttatgctgacagct
atgaccgccagcgaagtgcgggaagctatcgtggggccggctcaagtttttggtgtcgaa
acagacaccaattttgccaccaacttggctgccgaagttaccaagggcgaaggtcgtctg
ccccttttgcaggaagcgttgcgtcaatgctgggctcgcataaggtttggagagcaaggc
tggaatttgtatcaaccagaagatctttctgaaggaaaagaaatccttttgcttgaagag
tcggttgggcggcgtggcgatgaagcgatgggggaaatagaaaggcattacaagccagtc
gaggttaatcgcatgttgctgtccctggtccggtgggtggacggtcgcccgctccggcgc
attctatccatgatggagagtgatgaatctgacgttcccatgattgcgatgctggctaat
caacgcttggtgattctaagcggggatgggtcccgccggactgccgagttagtgcacgag
gcactgatgacccgttgggcacggttggcgagtttgattagcaaccaccacgtctttcta
gagtggcgcgatcggtttgatcgagagtttatcgtatgggaacgtggcaggtgtgaggaa
aaggaccttctacgtcgccatgatgtacaattggcgatgagttggaaagagaatgttgat
ggtttttttatcgctcccacatctcgtcaattaaaatttattgatgaaagttatttattt
tatgaaaaagaagaaataagacgagaggaggattttagacaaaaagagaaacaaaataga
cgcattcgaaaatggttgctgttatctatttttgcactatttttattttttatattttta
tgtctaagtatatttacttttaaaaaagctcaagatgaaacttattccgctcagatgcag
gaatccagggctctggccgtactcgctcgccaagagagcgaaaagggagatcaagggaca
gccatactcttagccttggagggcttgcctgaccccgggtttggcgggaagcggccttta
tctcccgaggcagctaccatgctgcgccaagcttggttgcgaaatagggaggtgaccacg
gtggggtatgatggtccggtgcgtgtcgcaagcttgagttccgatggccagcgtgtggtt
gtggcatctgacgacgaaatagtgcgggtgtgggatttgtcagcaccaaaatcaccagga
atcaacttgggggagcatcaaggatcagtgttttctgccaatctgagccctgatggccag
cgtgcggtcaccgcatcctatgatggaatagtgctggtgtgggatctttcggcaccgaaa
tttccggcgattactttggcggggtcttcaggttcagtgctttctggcagggaatctgtc
agttttagtcctgatggtcagcgtgtactcaagacatcagaagatggaaccgcgcaggtg
tgggacctgtcgtcatccaaaatccaagcgatcactctgggggagcggggacattacgtg
cagtccgccagtttcagtcccgatggccggcgtgtggtcactgcatcaagtgacggagca
gcacaagtgtgggatctatcagcaccaaaaactcaggcgattcttcttgagggacacgag
caaccagtgcagtccgctagtttcagccccgatggccagaaggtggttactgtatcaagt
gacggaacagcacgagtttggaatctttcagagcccaaacctcaagcgcttttacttgat
ggacacaaaggtcttgtacaattagccagcttcagtcccgatgggcaacatgtggtcacg
gcatcaggtgatacagcacgggtttgggacttgtcggcaccaaagtctcaggcatttctc
ctcgagggacatgaggggtcaatacaatccgcgagcttcagccccgacggtcgacgcgtg
gttaccggctcaggtgaaggtacggtacgagtgtgggatctatcggcacccaaatctcaa
ccgatcctcttgagagggcatctgagagcgacgttttttgccagatttagcgccgacggc
aggtctgtcgttacagcttcttatgacggaacagcgcgagtatgggctgtgccggcggtt
gagccaggggaacttttcttggaaggatccgatgactcagtgcggtccgccagcttcagt
cctgatggcgagcatttggttacgatatctgacgataaaacggtgcgggtgtgggatctc
tcggtacctaagcctcgatcgcttctcctggagggatatgaaggttcggtgcaatccgcg
agctttagccccgatgggcagcgtttggtcacggtatcggatgacaaaaccgcacgcgtg
tgggacctcgcagaacctaaagctaaggcgcttattcttgagggggacgatgcttcggta
ggctccgctagctttagtccggacggtcggcgtgtggtcacagcttcttatgacaaaacg
gcacgtgtgtgggacctatcggcacttaaaccccgggcgatcaccttggagagtagtctt
ggttgggtgggatcggccaactttagcccggacggtcagcgtgtggtcggggcctcttat
ggcggagcgcagatatgggatctttcagtccctgaacgaccaaaattgtgcatgcgtctc
aagcagctaaacgcaggattgctacaatctgctagcttcagccccgacggtggacgcgtg
gtcacagtatctgatggtgggacaagagttgtggatctatcgacaccaaaatccccaccg
atcacgttaggggggcgtctggatcgagcgcgatccgccagctttagccccgacggtcag
cgcgtactcactgcgtcctatgatgggacggcacgggtttgggacttggccggttctcag
gcctccgccctcgtccttggtgaatactctagctctatgctctacgccaacttcagtcgt
gatggacgcagggtattaaccttttcttcgccaaataagctgcgcgtttgggatgtttat
ccggatattagggagctctcttctctcgtaagaaagcggttaacgcggtgcctatccact
gctcagcgggaggagtttggtttgcgggtggaagatagaaagcggaaccgtgatgccatt
ccaattcccgattctgaaggaaactgtccccgttga
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