Rhodospirillum rubrum F11: F11_06785
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Entry
F11_06785 CDS
T02006
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rrf
Rhodospirillum rubrum F11
Pathway
rrf00061
Fatty acid biosynthesis
rrf00071
Fatty acid degradation
rrf01100
Metabolic pathways
rrf01212
Fatty acid metabolism
rrf02024
Quorum sensing
rrf04146
Peroxisome
Module
rrf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rrf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
F11_06785
00071 Fatty acid degradation
F11_06785
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
F11_06785
09145 Cellular community - prokaryotes
02024 Quorum sensing
F11_06785
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rrf01004
]
F11_06785
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rrf04147
]
F11_06785
Enzymes [BR:
rrf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
F11_06785
Lipid biosynthesis proteins [BR:
rrf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
F11_06785
Exosome [BR:
rrf04147
]
Exosomal proteins
Exosomal proteins of breast milk
F11_06785
Exosomal proteins of breast cancer cells
F11_06785
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AEO47827
LinkDB
All DBs
Position
complement(1548113..1549804)
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AA seq
563 aa
AA seq
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MHDSPLPPSSLTTAPRLPLPSGPVCAMLDAIIARFPDNPAIDFLGRKWTYRELGEQIDRA
CAGFQSLGVEPGTRVGLCLPNTPYYIICYYGVLKAGGIVVNFNPLYVERELRELVEDSGT
TLMVTLDLRQIYPKVAALLGDTALERIVVCSMSAILPSVKSLLFSVLKRSELADVPTDRR
HIGFAKLIATKTPPRPVAIDPATAVAVLQYTGGTTGLPKGAMLTHANVTGNLTQILGWFP
EARWGEEKMLAVLPFFHVFAMTVAMNVALALGAELILLPRFDLETVLKTIARKKPTLFPG
VPTIYSAIIGAVAKTPYDLSSLRFCLSGGAPLPIEVKTRFEELTGCTLIEGYGLSEASPV
VCCNPLDGAIKPGSIGQPLPGTTVEIRSVLDPALIVPRGERGEICVRGPQVMAGYWRRPQ
DTEDTFIDGALRTGDIGYIDDEGYVFLVDRIKDVILCGGYNVYPRIIEEALYQHEAVAEA
VVIGLPDDYRGEAPKAFVRLRDGHSATPEDLKTYLATQISRIEMPKTIELRDDLPRTMVG
KLSKKALVDEERAKALAGADKAS
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgcatgactccccgcttccgccttccagtctcacgacggccccgcgcctgcccctgccc
agcgggccggtttgcgcgatgctcgatgcgatcatcgcccgctttcccgataatccggcc
atcgatttcctcggccgcaaatggacctaccgcgagttgggcgagcagatcgaccgcgcc
tgcgccggcttccaaagcctgggggtcgaacccggcacgcgggtcggcctctgtctgccc
aatacgccctattacatcatctgttactacggcgtgctcaaggccggcggcatcgtcgtc
aatttcaacccgctttacgtcgagcgggaattgcgcgaactggtcgaggattcgggaacc
acgctgatggtcaccctcgatctccgccagatctaccccaaggtcgccgccctgttgggt
gatacggcgctcgagcgcattgtcgtctgctcgatgtcggcgatcctgccttcggtgaaa
agcctgctctttagcgtgctcaagcgctccgaactggccgatgtccccactgatcggcgc
catatcggctttgccaagctgatcgccaccaaaaccccgccgcgccccgtcgccatcgac
ccggccaccgccgtcgccgtcttgcaatacaccggcggcaccaccggcctgcccaagggc
gcgatgctgacccatgccaatgtcacgggcaatctcacccagatcctcggctggttcccc
gaggcgcgctggggcgaggaaaagatgctcgccgttttgccgttcttccatgtcttcgcc
atgaccgtggcgatgaacgtcgccctggcgctcggcgccgagctgatcttgctgccgcgc
ttcgatctggaaaccgtgctcaagaccatcgcccgcaaaaagccgacgctgttccccggg
gtgccgaccatttactcggcgatcatcggcgccgtggcgaaaaccccttacgacctgtcg
tcgctgcgcttttgtctgtcgggcggcgcgccgctgcccatcgaggtcaaaacccgcttc
gaggagttgaccggctgcaccctgatcgaaggctacggcctgtcggaagcctcgccggtg
gtgtgctgcaacccgctcgacggcgcgatcaagccgggctcgatcggtcagccgctgccc
ggcaccaccgtcgagatccgttcagtccttgatccggcgctgatcgtgccgcgcggcgaa
cgcggcgagatctgcgtgcgcggcccccaggtgatggccggctattggcgccgtccccag
gacaccgaggacaccttcatcgacggcgcgctgcgcaccggcgacatcggctatatcgac
gacgagggctatgtcttcctcgtcgaccgcatcaaggatgtcatcttgtgcggcggctac
aacgtctatccccggatcatcgaggaagcgctctatcagcacgaggcggtggccgaggcg
gtggtcatcggcctgcccgatgattaccgcggcgaggcgcccaaggccttcgtccgcctg
cgtgacggtcacagcgccacccccgaagacctcaagacctatctcgccacccagatttcg
cgcatcgaaatgcccaagaccatcgaactgcgcgacgacctgccgcgcaccatggttggc
aagctttccaaaaaagccttggtcgacgaggaacgggccaaagccttggccggcgcagac
aaggcctcctga
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