Rhodospirillum rubrum F11: F11_07170
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Entry
F11_07170 CDS
T02006
Name
(GenBank) NifA subfamily transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
rrf
Rhodospirillum rubrum F11
Pathway
rrf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rrf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
F11_07170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rrf03000
]
F11_07170
Transcription factors [BR:
rrf03000
]
Prokaryotic type
Helix-turn-helix
Other families
F11_07170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF_2
GAF
AAA_5
AAA
bpMoxR
GAF_3
AAA_2
IstB_IS21
HTH_50
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AEO47904
LinkDB
All DBs
Position
1639371..1640972
Genome browser
AA seq
533 aa
AA seq
DB search
MLMDYTYAIDLDDFVDDSTDCKTGECRVAVLPILFQISQIISESEDLPRSLAIILKVMQQ
RMRIGRGTVSLYDRESGKIFVHESFGGRDDQQALGASGPGRGITAKVVDSGKAIIVPELR
DSPTKPNRTQLQADGSDLAVSFFCVPILRGRKVLGTISAERVYANRRLLKQDVELIATIA
SMIAPAVELYLLENIDKVRLENENRRLHDALKSRFKPTNIIGTSKPMQEVYDLIHKVAMT
KATVLILGESGVGKELVASAIHYNGATAEGPFIKFNCAALPESLGESELFGHEKGAFTGA
IAQRKGRFEMADGGTIFLDEVGELSLAMQAKLLRVLQEKTFERVGGGRSVRVDVRIIAAT
NRNLPEMVEKGTFREDLFYRLNVFPITLPPLRDRGSDVILLVDHFIARHAAEGGREAKRV
STPALTMLMAYHWPGNVRELENVIERSVILSEDGVIHGYNLPPSLQTATETGTSFGCGLE
AKLQAVEYEMIVEALKTHGGNATEAAKELGLTRRILGLRMEKYALNYKTYRKR
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgcttatggactatacctatgcgattgatctcgacgatttcgtcgatgattccaccgac
tgcaagaccggcgaatgtcgtgtcgccgttctgccgatcctgttccagatcagccagatc
atttccgagagcgaggatttgccccggtctctggcgatcattctcaaggtcatgcagcag
cgcatgcgcatcggccgcggaaccgtcagtctttatgaccgcgaaagcggcaagatcttc
gttcacgaaagctttggcggccgggacgaccagcaggccctgggcgccagcgggccgggg
cgcggcatcaccgccaaggtggtggactcgggcaaggcgatcatcgtgcccgaactgcgc
gacagcccgaccaagcccaaccgcacccagcttcaggccgatggcagcgatttggcggtg
tcgttcttctgcgtgccgatcctgcgcggtcgcaaggttctgggcaccatcagcgccgag
cgcgtctatgccaatcgccggctgttgaagcaggacgtggaactgatcgccaccatcgcc
tcgatgatcgccccggcggtggagctgtatcttttggagaacatcgacaaggtgcggctg
gaaaacgagaatcgccgtctgcacgacgccctgaaaagccgcttcaaacctaccaatatc
atcggcacctccaagccgatgcaagaggtctatgatctgatccacaaggtggcgatgacc
aaggccaccgtgctgatcctcggggaaagcggcgtcggcaaggaattggtcgccagcgcc
atccattacaacggcgccaccgccgaagggccgttcatcaagttcaattgcgccgccttg
cccgaaagcctaggcgagtccgagttgttcggtcacgagaaaggcgccttcaccggcgcc
atcgcccagcgcaaggggcgcttcgagatggccgacggcggcaccatctttctcgacgag
gttggcgagctgagtttggccatgcaggccaagctgttgcgggtgctccaggaaaagacc
ttcgagcgcgtcggcggcggccggtcggtgcgcgtcgacgtgcggatcatcgccgccacc
aaccgcaatctgcccgagatggtcgagaagggcaccttccgcgaggatctgttctaccgg
ctcaatgtcttccccatcaccttgccgccgctgcgcgaccggggcagcgacgtgatcttg
ctggtcgatcatttcatcgcccgccacgccgccgagggtgggcgcgaggccaaacgggtg
tcgaccccggccttgaccatgctgatggcctatcactggccgggcaatgtgcgcgaactg
gaaaacgttatcgaacgctcggtgatcttgtcggaagacggggtgatccacggctataat
ctgccgccctcgctgcagacggcaacggagaccggcacgtcgtttggctgcggcctggaa
gccaagctgcaggcggtggaatacgaaatgatcgtcgaggccctgaaaacccatggcggc
aacgccaccgaggcggccaaggagttggggctgacccggcgcatccttggcctgcgcatg
gaaaaatacgccctcaattacaagacttatcgcaagcgctga
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