Rhodospirillum rubrum F11: F11_07575
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Entry
F11_07575 CDS
T02006
Name
(GenBank) LysR family transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
rrf
Rhodospirillum rubrum F11
Brite
KEGG Orthology (KO) [BR:
rrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rrf03000
]
F11_07575
Transcription factors [BR:
rrf03000
]
Prokaryotic type
Helix-turn-helix
LysR family
F11_07575
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_34
Motif
Other DBs
NCBI-ProteinID:
AEO47985
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Position
1732186..1733130
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AA seq
314 aa
AA seq
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MVPSFRQIRAFLAVARHLKFTRAAEELNVSQPTLTVQINQMEEALSVKLFDRNKRQVSLT
PAGRNLIPLLERVLADMDEVMLASSDLALARRGTVRVAALPSVSARLLPVAMVRFKKSHP
GIVVRVRDVVGEDIVALVKAEEVDFGVGIRLTPDRDIKVEDFVSDSICAFFPNGHPLETG
PSILTMADCVAYPLILTGRNSSVRVLFERSMAREGVEVQVAAEANYMSTALGMVRAGLGV
AVLPASAVDSGNAIGLGFKVIDAPWLSRRVGIVRKSGRSLPPVAELFIDALHEVAAGRPD
ANFTSARRPETRRG
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtggttccgagtttccggcaaatccgcgccttcctcgccgtcgcccggcatctgaagttc
acccgggcggccgaggagttgaacgtctcgcagccgaccctgaccgtgcagatcaaccag
atggaagaggccctgtcggtcaagctgttcgaccgcaacaagcgtcaggtctcgctgacg
ccggcggggcgcaacctgatcccgctgcttgaacgggttttggccgatatggacgaggtg
atgctggccagcagcgatctggcgctcgcccgccggggaacggtgcgggtcgccgctctg
ccctcggtctccgcccgcctgttgcccgtcgccatggtccgcttcaagaaaagccatccc
ggcatcgtcgtgcgggtgcgcgatgtggtcggcgaggacatcgtcgccctggtcaaggcc
gaagaggtggatttcggcgtgggaatccgcctgacccccgaccgcgacatcaaggtcgag
gatttcgtctcggattcgatctgcgccttctttcccaatggtcatcctttggaaacgggc
cccagcattctgaccatggccgattgcgtggcctatccgttgatcctgaccggacgcaac
agtagtgttcgcgttttgttcgagcgatcgatggcgcgcgagggggtggaggtgcaggtg
gcggccgaagccaactacatgtcgacggccctgggcatggtgcgggccggcctgggggtg
gcggtgcttcccgcctcggcggtcgattccggcaatgccatcggcctcggcttcaaggtc
atcgatgccccctggctcagccgccgggtgggtatcgtgcgcaaatccggtcgctcgctg
ccccccgtcgccgagttgttcatcgatgccctgcacgaggtggccgccggccgccccgat
gccaatttcacctctgcccgccggccggaaacccgccgggggtaa
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