Rhodospirillum rubrum F11: F11_09590
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Entry
F11_09590 CDS
T02006
Name
(GenBank) lytic transglycosylase, catalytic
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
rrf
Rhodospirillum rubrum F11
Brite
KEGG Orthology (KO) [BR:
rrf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rrf01011
]
F11_09590
Enzymes [BR:
rrf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
F11_09590
Peptidoglycan biosynthesis and degradation proteins [BR:
rrf01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
F11_09590
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SLT
Phage_lysozyme2
TPR_2
SLT_4
TPR_7
TPR_8
Motif
Other DBs
NCBI-ProteinID:
AEO48384
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Position
2162763..2164757
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AA seq
664 aa
AA seq
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MRLLSIVLVCLIILPLAARAAPLSVSDEATYAGAFRAADLGQWPQAMALARSASDQTLRD
VVLWRQLRAAGRDNAGLEDRMAFVLGHPDWPLLSTIQRLAEDDMLSLPRAPSQVIGFLER
RKPVSPGGEIALARAYLASGARDKAARLIRSAWVAGDFTASQEKDLLGTYGDLLRTDDHW
ARADRVMWDNRIDAARRMVPRLDKARAAVITARVTLAEGKIDPNAAVNAVPKALQNDPGL
VFERARWRRLAGLDDAAIELMLHRPSAEGRADRWWQERAVLLREALDRGLITKAYRLAAT
HENDRGAAFAEGEWLAGWIALRFLHDAPQAFKHFKTLYEGVSTPISLSRGAYWAGRAAEA
MKRPDEARQWYQKASAFPATFYGQLAAERTGAPLSKLLPKADAAASDAERKALANDRLVV
IASQLAQIGRIDELLSFTLALNTKHKGDGARAMIAGIALKAGYPGVGVFVSRRAAQDGTY
LVEAGYPLPKALAPSISEHARRQGVDPAALLGLIRQESNFDRAARSAVGALGLMQLMPGT
ARTVSGQEGLAFDQALLTRDPLYNVRLGARYFGDLLKRFDGSVVLAAAAYNAGPGRPTEW
IARNGDPRAMDLADAIDWIEMIPYRETRNYVQRVIEGMLVYQVRLGQTLPAKAPAQALGI
AGRS
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtttgctttccatcgtgctcgtctgcttgatcattctgcccctcgccgcccgggcc
gccccgctgtcggtcagcgatgaggcgacctatgccggcgcctttcgcgccgcggatctc
gggcaatggccccaggcgatggccctggcgcgcagcgcgtcggatcagacgctgcgcgat
gtcgtgctctggcgccaattgcgcgccgccggccgcgacaacgccggccttgaggaccgc
atggctttcgtcctcggccatcccgactggcccttgctgtcaaccatccagcgcctagcc
gaagacgacatgctgtcgctgccgcgcgcgccctcgcaggtcatcggctttctcgaacgc
cgcaagccggtctcccccggcggcgagatcgccctggcccgggcctatctggcctcgggc
gcccgcgacaaggcggcgcggctgatccgctcggcctgggtcgcgggggatttcaccgcc
agccaggaaaaggacctgctcggcacctatggcgacctgctgcgcaccgacgaccattgg
gcgcgcgccgacagggtgatgtgggacaaccgcatcgacgcggcccggcgcatggtgccg
cggctggacaaggcgcgcgccgcggtgatcaccgcccgggtgaccctggccgagggcaag
atcgaccccaacgccgcggtcaacgccgtgcccaaggccctgcaaaatgatccgggtctg
gttttcgaacgcgcccgctggcgacggctggccgggcttgacgacgcggcgatcgagttg
atgctccaccggccctcggccgagggccgggccgaccgctggtggcaggaacgcgccgtt
ctgctgcgcgaggccttggatcgcggcctgatcaccaaggcctatcgtctggccgccacc
cacgaaaacgaccggggcgccgccttcgccgagggggaatggttggccggctggatcgcc
ttgcgcttccttcacgacgcgccccaggccttcaagcacttcaaaaccctgtatgaaggg
gtctcgacgccgatcagcctgtcgcgcggcgcctattgggccgggcgggcggccgaggcg
atgaagcggcccgacgaggcgcgccagtggtaccagaaggccagcgcctttcccgccacc
ttttatggtcaattggccgccgagcgcaccggcgctccgctctcgaaactgttgcccaag
gccgatgcggcggcgagcgacgccgaacgcaaggccctagccaatgatcggctggtcgtc
atcgccagccaactggcccaaatcggccgaatcgatgaattgctgtctttcaccctggct
ttgaacaccaagcacaagggggacggcgcccgggcgatgatcgccggcatcgccctgaag
gccggctatcccggcgtcggcgtcttcgtgtcgcgccgcgccgcccaggatggcacctat
ctggtcgaggccggctatccgctgcccaaggccctagccccttcgatcagcgagcacgcc
cgccgccagggcgtcgatccggcggcgcttctcgggctgatccgccaggaaagcaatttc
gaccgcgcggcgcgctcggcggtgggcgccttggggctgatgcagcttatgccgggcacg
gcgcgcacggtttcaggccaggaggggctggccttcgatcaggcgctgctgacccgcgat
cccctctacaacgtgcggctgggagcgcgctatttcggcgatctgctcaagcgctttgat
ggatcggtggtgctggcggcggcggcctataacgccggcccggggcggccgaccgaatgg
atcgcccgcaatggcgatccgcgcgccatggatctggccgacgccatcgactggatcgag
atgatcccctatcgcgaaacccgcaattacgttcagcgggtgatcgaaggcatgctggtt
tatcaggtgcgccttggtcagaccctgccggccaaggcgccggctcaggccctgggcatc
gccgggcgctcgtaa
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