Rhodospirillum rubrum F11: F11_13235
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Entry
F11_13235 CDS
T02006
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
rrf
Rhodospirillum rubrum F11
Pathway
rrf00500
Starch and sucrose metabolism
rrf01100
Metabolic pathways
rrf01110
Biosynthesis of secondary metabolites
Module
rrf_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
rrf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
F11_13235
Enzymes [BR:
rrf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
F11_13235
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
GlgX_C
pulA_all-beta
Motif
Other DBs
NCBI-ProteinID:
AEO49109
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All DBs
Position
2997333..2999354
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AA seq
673 aa
AA seq
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MSIRARLDAGEPWPLGAMAREGGVNIAVFSEAATQIDLCLFDGDQETRLPLPARTGDIWH
GFLPGGGPGLRYGLRAHGPYDPGRGQRFNPHKLLIDPAARRLDGPVVWDKALFGFDPDHP
ERDLSFSIRDSAAFVPKAVVEADPATRALRSPPDPGRLLIYEAHVKGLTRTHPQVAPEAR
GTFDGVAGSAVIAHLKHMGVTALELLPVWAFADEPHLPPLGLTNYWGYNPVCLTAPHAAY
GPPDSFRRMIDCLHGADIAVILDVVLNHSGEGDEYGPTLSFRGLDNAAYYRLDPTDPRRY
LNDSACGNTLRMEHPQVLRLAMDALRYWVGVMGVDGFRFDLAVTPARHKGAFDPSGPFLS
AIAQDPLLSRALVIAEPWDVGPGGYQAGRFPKSWMEWNDLARDGLRRFWLANGRSGDLAA
VLAGCAARYAPSGRGPRAGVSYISAHDGFTLADMVSYGHRHNNANGESNRDGSAIELSAN
HGVEGPTNDLAIRSLRDRQRRNLLACLLLSLGVPMIRGGDELGQTQQGNNNVYCQDNPLN
WLDWGGADANFAAFAARAGALRARLPQLGRASFLNGFPDAKGKRDVVWLRPDGGEMSPAD
WDALPRLLAMRLTGAEKASDLLVLINGQPHEQSFRLPPGPAWTIALRSAGDDAPAAAGSS
LVVPEMSLVALTS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagtatccgcgcccggctggacgccggcgagccatggcccctgggcgccatggctcgc
gagggcggcgtcaatatcgccgtcttttccgaggcggcgacgcaaatcgatctttgcctg
ttcgacggcgaccaggaaacccgcctgcctttgcccgcgcgcaccggcgacatctggcat
ggcttcctgcccggtggcgggccgggcttgcgctatggcctgcgcgcccacggcccctat
gatccgggccggggtcagcgcttcaatccccacaagctgctgatcgatcccgccgcccgc
cgcctggacggaccggtggtctgggacaaggcgctttttggcttcgatcccgaccatccg
gaacgcgatctgtcgttttccatccgcgacagcgcggccttcgtgcccaaggcggtggtc
gaggccgaccccgccacgcgcgccttgcggtccccccccgatcccggccgcctgctgatc
tatgaggcccatgtcaaaggcctgacccgcacccatccccaggtcgccccggaggcgcgc
ggcacctttgatggcgtcgccggatcggcggtgatcgcccatctcaagcacatgggcgtc
accgccctggaactgctgccggtctgggccttcgccgacgaaccccacctgccgccgctc
gggctgaccaactattggggctataacccggtctgcctgaccgccccccacgccgcctat
ggcccgcccgactccttccggcgcatgatcgattgcctccatggcgccgatatcgccgtg
atcctcgatgtcgttctcaaccattcgggcgagggcgacgaatacggaccgacgctcagc
ttccgtggtctcgacaacgccgcctattaccgcctcgatcccaccgatccccggcgctac
ctcaacgacagcgcctgcggcaacaccctgcgcatggagcatccccaggtcttgcggctg
gcgatggacgccttgcgctattgggtgggggtgatgggggtggatggcttccgcttcgat
ctcgccgtcactccggcccgccacaagggggctttcgatcccagcggtcccttcctcagc
gccatcgcccaggatccgctgctctcgcgcgccctggtgatcgccgagccctgggatgtc
ggccccggtggctatcaggccggccgtttccccaagtcctggatggaatggaacgatctg
gcccgcgacggcttgcgccgcttctggctggccaatggccgatcgggggatctggccgcg
gtgctggccggctgcgccgcgcgctatgccccctcgggtcgcggtccaagggccggggtt
tcctatatcagcgcccacgacggcttcaccctggccgatatggtcagctatggccatcgc
cacaacaacgccaatggcgagagcaaccgcgacggatcggcgatcgagctttcggccaat
cacggggtcgaaggcccgaccaacgatttggccatccgctcgttacgcgatcgccaacgg
cgcaatctgctggcctgcctgctgttgtcgctgggcgtgccgatgatccgcggcggcgat
gaactgggccaaacccagcagggcaacaacaacgtctattgtcaggataacccgctcaat
tggcttgattggggcggcgccgatgcgaatttcgccgccttcgccgcccgcgccggcgcc
ctgcgggcaagactgccccaattgggccgggcgagttttctcaacggcttccccgacgcc
aaggggaaacgcgacgtggtctggctgcgccccgatggcggcgaaatgagccccgccgat
tgggacgccctgccccgcttgctggccatgcggctgaccggcgccgagaaggcttccgac
ctgctggtgctgatcaatggccagccccacgagcaatccttccgcctgccccccggtccg
gcctggacgatcgccctgcgcagcgccggcgacgacgcgcccgccgccgccgggtccagt
ctggtggtgccggaaatgtcgctggtcgccctcaccagttaa
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