Rhodospirillum rubrum F11: F11_14775
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Entry
F11_14775 CDS
T02006
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
rrf
Rhodospirillum rubrum F11
Pathway
rrf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rrf00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
F11_14775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rrf03021
]
F11_14775
Transcription machinery [BR:
rrf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
F11_14775
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
EFhand_Ca_insen
Motif
Other DBs
NCBI-ProteinID:
AEO49417
LinkDB
All DBs
Position
complement(3322342..3324432)
Genome browser
AA seq
696 aa
AA seq
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MATKATNTAEAVNTQEEGGDSPLLDSMNAAVKKLVNRGKDRGYITYDELNNALPPDDVSS
EQIEDTMAMLSDMGINVVEDEEEGEASAAPPAEAGEEEPGREVAATGNVSEDDIGRTDDP
VRMYLREMGSVELLSREGEIAIAKRIEAGREMMIGGICESPLTIRALLQWHDALVDGRML
LRDIIDLDATYGSGAGPDVVAEGLEDSVVPLSPLALSPARALPKEADEAEEAVTPGRDDD
SEDEDEGDDAKPADGAGDEEAAPSGEDEGDGSENNVSLAAMEQELMPRVLETFEHIATTY
GKLKKAQDQRIAALQKGEEPGAALERKYDKLKLELVGLMEDVHLNNARIEQLVEQLNALN
KGLITQEGKLLRLAERAKIRRDEFLDHYFGREMDPSWREDVAALPGKGWRDFTTRFADEI
KDIRGSIAEIAERSLLPIPEFRRIVSTVQKGEREASRAKKEMIEANLRLVISIAKKYTNR
GLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMI
ETINKLVRTSRQMLHEIGREPTPEELAEKLQMPLEKVRKVLKIAKEPISLETPIGDEEDS
HLGDFIEDKNAVQPLDAAINSNLRETCTRVLASLTPREERVLRMRFGIGMNTDHTLEEVG
QQFSVTRERIRQIEAKALRKLKHPSRSRKLRSFLDN
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaaggcgaccaacacggcggaagcggtgaacacccaggaagagggcggcgat
agccccttgcttgattcgatgaacgccgccgtcaagaaattggtcaaccggggcaaagac
cggggttacatcacctacgacgaactcaataacgctctgcccccagacgatgtgtcctcc
gagcagatcgaggacaccatggccatgctttccgatatgggaatcaacgtcgtcgaggac
gaggaagagggcgaggccagcgccgcccccccggccgaggccggcgaggaggaacccggc
cgcgaagtcgccgcgaccggcaatgtcagtgaagacgatatcggccggaccgacgatccg
gtgcgcatgtatctgcgcgagatgggctcggtcgaactgctgtcgcgcgagggcgaaatc
gccatcgccaagcggatcgaagccggccgcgagatgatgatcggcggcatctgcgaaagc
ccgctgaccatccgcgccctgctgcaatggcacgacgccctggtcgatggccgcatgctg
ctgcgcgacatcatcgatctcgacgccacctatggctcgggcgccggtcccgacgtggtg
gccgaaggcctggaagactcggtggtgccgctgtcgccgttggccctgtctccggcccgc
gcccttcccaaagaggccgacgaggccgaagaggccgtgacgcccgggcgcgatgacgac
tccgaagatgaggacgagggcgacgacgccaagcccgccgatggggcgggcgacgaggag
gccgcgccgagcggcgaggacgagggcgacggcagcgagaacaacgtgtccctcgccgcc
atggaacaggagctgatgccccgggttctggaaaccttcgagcatatcgccaccacctat
ggcaagctgaagaaggcccaggatcagcgcatcgccgccttgcaaaagggcgaggagccg
ggcgcggcgctggagcgcaaatacgacaagctgaagctggagctggtcgggctgatggag
gatgtccatctgaacaacgcccgcatcgagcagctggtcgagcagctcaacgcgctgaac
aagggcctgatcacccaggaaggcaagctgctgcgtctggccgaacgggccaagatccgc
cgcgatgaattccttgatcactacttcggccgcgagatggacccgagctggcgcgaggat
gtcgccgcgctgccgggcaagggctggcgcgatttcaccacgcgcttcgccgatgagatc
aaggatatccggggctcgatcgccgagatcgccgagcgctccttgctgcccatccccgag
ttccgccgcatcgtgtcgacggtgcagaagggcgagcgcgaggccagccgggccaagaag
gagatgatcgaagccaacctgcgcctcgtcatctcgatcgccaagaaatacaccaaccgc
ggtctgcagttcctcgacctgattcaggaaggcaacatcggcctgatgaaggcggttgat
aagttcgaataccgccggggctacaagttctcgacctatgccacgtggtggatcagacag
gcgatcacccgctcgatcgccgatcaggcccgcaccatccgcattccggtgcatatgatc
gagacgatcaacaagctggtccgcacctcgcgccagatgctccacgagatcggccgcgag
ccgacccccgaggaactggccgaaaagcttcagatgcccttggagaaagtgcgcaaggtt
ctgaagatcgccaaggagccgatcagcctggaaacgccgatcggcgacgaggaagacagc
cacctgggcgatttcatcgaggacaagaacgccgttcagcctttggacgcggcgatcaac
tcgaacctgcgcgaaacctgcacccgggtgctggccagcctgacaccacgcgaggagcgc
gtgctgcgcatgcgctttggcatcggcatgaacaccgaccacaccctggaagaggtgggc
cagcagttcagcgtgacccgcgagcgtatccgccagatcgaagccaaggccctgcgcaag
ctcaagcatccctcgcgctcgcgcaagctgcgctctttcctcgacaactga
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