Rhodospirillum rubrum F11: F11_16060
Help
Entry
F11_16060 CDS
T02006
Name
(GenBank) Orn/DAP/Arg decarboxylase 2
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rrf
Rhodospirillum rubrum F11
Pathway
rrf00300
Lysine biosynthesis
rrf00470
D-Amino acid metabolism
rrf01100
Metabolic pathways
rrf01110
Biosynthesis of secondary metabolites
rrf01120
Microbial metabolism in diverse environments
rrf01230
Biosynthesis of amino acids
Module
rrf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rrf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
F11_16060
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
F11_16060
Enzymes [BR:
rrf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
F11_16060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AEO49674
LinkDB
All DBs
Position
3614947..3616161
Genome browser
AA seq
404 aa
AA seq
DB search
MTASPPPGFGVSGSDLTIGGQRVSHLARIAGGTPFYAYDRGAVSARIAALRAALPAGMAI
RYSLKANPMAALLAHMAPLVDGFDAASAGELRAGLAVGMAPAALSIAGPGKSPADILSAV
AAGALVVVESLAEVGRVAQAGNASGLRPRVLVRVNPEAEIQGAGLRMGGGARPFGIDADQ
VPGVLAAIAAHDLDYQGLHCFWGSQALDAERIARAFAVVGQTLLDLAGPRPPRQIVIGGG
FGIPYTPTSAPLDLARAGAAVAETAGLLGDHLPGVSLGLELGRFLVGEAGVYVCAIRESK
RSRGNLFLVTDGGLHHNQAATGNFGQVVRRPYPLVIATRMGEPVSERATITGCLCTPLDV
FAEALAIPAAAEGDLVAIFQSGAYGASASPSAFLGHPPAVELLV
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcctccccgccccccggcttcggcgtgagcggaagcgacttgacaatcggcggc
caaagggtgtcgcacctggcgcggatcgccgggggcacgccgttttacgcctatgaccgg
ggcgcggtgagcgcgcgcatcgccgccctgcgcgcggcgctgccggccgggatggcgatc
cgctattccctcaaggccaatccgatggcggccctgctcgcccatatggcgccgctagtc
gatggcttcgatgccgcctcggccggcgaactgcgcgccggtttggccgtgggcatggcc
ccggcggcgctgtcgatcgccggcccgggaaaaagcccggccgatattcttagcgccgtg
gcggcgggggcgctggtggtcgtggaaagcctggccgaggtcggacgggtcgcccaggcc
ggaaacgccagcggcctgcgcccgcgcgtcctggtccgcgtcaaccccgaggccgagatc
cagggcgcgggcttgcgcatgggtggcggcgcccgtccctttggcatcgacgccgatcag
gtgcccggggtgctggccgccatcgccgcccatgatctcgactatcagggcctgcattgt
ttctggggctcgcaggcgctggacgccgaacgcatcgcccgcgccttcgccgtggtcggc
cagaccctgctcgacctcgccggcccgcggccgccacgccagatcgtcatcggcggcggc
tttggcatcccttacacgccgaccagcgcgccgcttgatctggcgcgcgccggggccgcc
gtcgccgagaccgccggcctgcttggcgaccacctgccgggggtgagcctgggcctcgag
ttgggccggttcctggtcggcgaggccggcgtatatgtttgcgccatccgtgaaagcaag
cgctcgcgcgggaacctgtttttggtgaccgatggcgggctgcaccacaatcaggcggcc
accggtaatttcggtcaggtggtgcgacggccctatcccctggtcatcgccaccaggatg
ggcgagcccgtaagcgagcgggcgacgatcaccggctgcctgtgcaccccgctcgatgtc
ttcgccgaggctttggcgatcccggcggcggccgagggcgatctggtggcgatcttccaa
tctggcgcctatggggccagcgctagcccgagcgcctttctcgggcatcccccggcggtt
gaactgctggtgtaa
DBGET
integrated database retrieval system