Rhodospirillum rubrum F11: F11_16650
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Entry
F11_16650 CDS
T02006
Name
(GenBank) A/G-specific DNA-adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
rrf
Rhodospirillum rubrum F11
Pathway
rrf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rrf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
F11_16650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrf03400
]
F11_16650
Enzymes [BR:
rrf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
F11_16650
DNA repair and recombination proteins [BR:
rrf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
F11_16650
Prokaryotic type
F11_16650
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_4
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_8
Motif
Other DBs
NCBI-ProteinID:
AEO49790
LinkDB
All DBs
Position
3746569..3747648
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AA seq
359 aa
AA seq
DB search
MTAPTPDSLPPASVLGERLLDWYRRNARTLPWRAPFGERTDPYRVWLSEVMLQQTTVPAV
IPYFQAFLARWPTVTDLAAAPLDEVLTAWAGLGYYARARNLHKCAQTIATWRDGTFPATE
DELHTLPGIGTYTAAAIAAIAFGQPAVVMDGNIERVMARLFAETEPLPQGKKALYARAAQ
LTPTAHPGEHAQALMDLGATLCTPRKPACGLCPWRDPCLGRRLGLAETLPAKAPKKLKPT
RCGIAFWVTRPDGTVLLRRRPESGLLGGMIEVPSTPWREDPWTLAEARAEAPLPAEWVPL
AGRVRHTFTHFHLDLDVVAGRVGARANARGLWVPFDQFDRHALPAVMLKVVRLALARTH
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccccaacccccgattcgctgccccccgccagcgtgcttggcgagcgcctgctt
gactggtaccggcgcaacgcccggaccctgccctggcgcgcgccctttggcgagcgcacc
gacccctatcgggtctggctatccgaggtcatgctccagcaaacgacggtgccggccgtc
atcccctatttccaggccttcctcgcccgctggcccaccgtcaccgatcttgccgccgcc
cccctggacgaggtgctgaccgcctgggccggccttggctattacgcccgggcccgcaat
ctgcacaaatgcgcccagaccatcgccacttggcgcgacggaaccttcccggcgaccgag
gacgagttgcacaccctgcccggcatcggcacctataccgccgccgccatcgccgccatc
gccttcggccagcccgccgtggtcatggatggcaatatcgaacgggtaatggcccgactg
ttcgccgagaccgagcctttgccccagggcaaaaaggcgctctacgcccgcgccgcccaa
ttgacgccgaccgcccatcccggcgagcacgcccaggcgctgatggatctgggggcgacg
ttgtgcaccccgcgcaagccggcctgcggcctgtgtccctggcgcgatccctgcctgggc
cgccggctgggtctggccgagaccctgccggccaaggcgccgaaaaaactgaagccgacg
cgctgtggcatcgccttttgggtcacccgacccgatggcaccgtgctgttgcgccgccgc
ccggaaagcggcctgctgggcggcatgatcgaagtgccctcgaccccttggcgggaagac
ccctggaccctggccgaggcgcgggccgaagcgccgctgcccgccgagtgggtgccgctg
gccggacgcgttcgccataccttcacccatttccacctcgacctcgatgtcgtcgccggc
cgggtcggcgccagggccaatgcccgggggctgtgggtgccctttgaccagttcgatcgc
catgccttgcccgccgtgatgctcaaagtcgtgcgactggctttggcgcgcacccattga
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