Rhodospirillum rubrum F11: F11_17995
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Entry
F11_17995 CDS
T02006
Name
(GenBank) DNA polymerase A
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rrf
Rhodospirillum rubrum F11
Pathway
rrf03030
DNA replication
rrf03410
Base excision repair
rrf03420
Nucleotide excision repair
rrf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rrf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F11_17995
03410 Base excision repair
F11_17995
03420 Nucleotide excision repair
F11_17995
03440 Homologous recombination
F11_17995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rrf03032
]
F11_17995
03400 DNA repair and recombination proteins [BR:
rrf03400
]
F11_17995
Enzymes [BR:
rrf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F11_17995
DNA replication proteins [BR:
rrf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
F11_17995
DNA repair and recombination proteins [BR:
rrf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
F11_17995
NER (nucleotide excision repair)
GGR (global genome repair) factors
F11_17995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
AEO50059
LinkDB
All DBs
Position
4045237..4048011
Genome browser
AA seq
924 aa
AA seq
DB search
MTEPKHLYLVDGSGYIFRAYHSLPPMTRTDGTPVNAVYGFTAMLMKLLADMDADHLAVIF
DKARVSFRNEIYPLYKAQRPPPPEDLIPQFPLIREAVRAFNVPCIERDGFEADDLIATYA
KRARAEGAIVTVVSSDKDLMQLVGEGVALFDPMKNRAIGPAEVFEKFGVAPDKVIDVQAL
AGDAVDNVPGVPGIGVKTAAQLIGEYGDLETLLARAAEIKQPKRRQSLLDHAEAARISLQ
LVRLRDDVEVSETLADFATAEPDAEVLAGFLAENGFRSLLARVTAVAHAKAGTTPQPAAA
PADDDYVLVNTLAELGVWIAKARAAGLVAIDTETDSLKARRATLVGVSLAITPGRACYIP
FAHGLRKAEGLDFDGAAPPVANIEDKAAALALLGDLLRDPGVLKVGHNLKFDLHVLANAG
LSDVAPVDDTMVLSYVLDGTLHGHGMDELAGLHLGRRTITFEEVCGKGKGQITFDQVPLD
KAVAYAAEDADVTLRLYLLLRDRLLKEHMVRVHETLDRPMVRILTDMEAAGVRVDALRLK
ALSGDFAKRMGDLEDQIHALAGHAFNVASPKQLGEVLFEEMSLTGGKKSRKTGAWSTDAQ
VLDQLAAEGHDLPARVLDWRQYAKLKGTYTDALVAEIDERTGRVHTTYGLTVTATGRLSS
NDPNLQNIPVRSEAGRKIREAFIAAPGHLLISADYSQIELRLVAHVAGITALRQAFAEGK
DIHAITASQVFGVPVEGMDPMVRRQAKAINFGIIYGISAHGLAQQLGVGRPEAAAFITAY
FARFPEIRSYMETVKEEARTVGWVATPFGRRIPIPGIQDKNPAARAFAERQAINAPIQGG
AADIIKRAMIALPPALEQAGLATRMLLQVHDELIFEAPEAEAETAAALVKRVMETAVTLT
DDQGERTVPLEVDTGIAASWAEAH
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagccgaagcacctctatcttgtcgacggttcggggtatattttccgcgcctat
cacagcctgccgccgatgacgcggaccgacggcacgccggtcaacgccgtttacggcttc
accgccatgctgatgaagctgctggccgatatggacgccgaccatctggcggtgatcttc
gacaaggcgcgggtctccttccgcaacgagatctacccgctttacaaggcgcagcggccg
ccgccccccgaagacctgatcccgcagtttccgctgatccgcgaggcggtgcgcgccttc
aacgtgccctgcatcgagcgcgacggcttcgaggccgatgatctgatcgccacctatgcc
aagcgggcccgggccgagggggcgatcgtgactgtcgtctcgtcggacaaggatctgatg
cagttggtgggcgagggcgtcgccctgttcgatccgatgaagaaccgcgccatcggtccg
gccgaggtgttcgagaagttcggcgtggcgcccgacaaggtgatcgacgttcaggctctg
gccggcgacgccgtcgataatgtgcccggggtgccgggcatcggcgtgaaaaccgccgcc
cagttgatcggcgagtatggcgatctggaaaccctgctggcgcgggcggccgagatcaaa
cagcccaagcgccgtcagtcgctgcttgatcatgccgaggccgcccgcatttcgcttcag
ctggtgcgcctacgcgacgatgtcgaggtgagcgagaccctggccgatttcgccaccgcc
gagcccgatgccgaggttctggccggcttcctggccgagaacggcttccgctcgctgctc
gcccgcgtcaccgccgtggcccatgccaaggccggcaccaccccccagccggccgccgcc
cccgccgacgacgactatgtcctggtcaatacccttgccgagcttggggtgtggatcgcc
aaggcgcgggccgccgggctggttgccatcgataccgagaccgattcgctcaaggcgcgg
cgcgctaccctggtcggcgtttcgttggctatcacccctgggcgggcctgctatatcccc
ttcgcccatggcctgcgcaaggccgaggggctggacttcgacggcgccgccccgccggtc
gccaatatcgaagacaaggccgccgccctggcgctgctcggcgatctgctgcgcgacccc
ggcgtgctcaaggtcggccataacctgaagttcgacctgcacgttctggccaatgccggg
ctgagcgacgtggcgccggtcgatgacaccatggtgctgtcctatgtgctggacggcacc
ttgcacggtcatggcatggatgaactggccgggctgcatctggggcgccggaccatcacc
tttgaagaggtctgcggcaagggcaagggccagatcaccttcgatcaggtgccgctcgac
aaggccgtcgcttacgccgccgaggatgccgacgtcaccttgcggctttacctgctgctg
cgcgaccgtctgctcaaggagcatatggtccgcgtccatgaaaccctcgaccggcccatg
gtgcggatcctcaccgatatggaggcggccggcgtgcgcgtcgacgcgctccggctgaag
gcgctgtcgggggatttcgccaagcgcatgggcgatctggaagaccagatccacgccctg
gccggccatgccttcaatgtcgccagccccaaacagcttggcgaggttttattcgaggaa
atgagcctgaccgggggcaagaaaagccgcaagaccggggcgtggtcgaccgacgcccag
gtgctggaccaattggccgccgagggccacgacctgcccgcccgcgtgcttgactggcgc
caatacgccaagctcaagggcacctataccgacgccctggtcgccgagatcgacgagcgc
accggccgcgttcataccacctatgggctgacggtgacggcgaccggccgcttgtcgtcc
aacgaccccaatctgcaaaacatcccggtgcgctcggaagccggccgcaagatccgcgag
gccttcatcgccgcccccggccacctgctgatcagcgccgattattcccagatcgaattg
cgccttgtcgcccatgtcgccggcatcaccgcgttgcgccaagccttcgccgagggcaag
gacatccacgccatcaccgcctcgcaggtcttcggggtgccggtggaggggatggacccg
atggtgcgccgtcaggccaaggccatcaatttcggcatcatctacggcatcagcgcccat
ggtctggcccagcagttgggcgtcggccgacccgaggcggcggccttcatcaccgcctat
ttcgcccgcttccccgagatccgcagctatatggaaaccgtgaaggaggaggcgcgcaca
gtgggttgggtcgccaccccctttggccggcgcatccccatccccggcatccaggacaag
aacccggcggcccgcgccttcgccgagcgtcaggcgatcaacgccccgatccagggcgga
gcggccgatatcatcaagcgggcgatgatcgccttgccccctgccttggaacaggccggc
cttgccacccgcatgctgcttcaggtccacgatgagctgattttcgaagcgcccgaggcc
gaggccgaaaccgccgccgccctggtcaagcgggtgatggaaaccgcggtcaccctgacc
gacgaccaaggggaaagaaccgtccccctggaggtcgacaccggcatcgccgcctcgtgg
gccgaggcccattaa
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