Rhodospirillum rubrum F11: F11_19350
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Entry
F11_19350 CDS
T02006
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rrf
Rhodospirillum rubrum F11
Brite
KEGG Orthology (KO) [BR:
rrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rrf03016
]
F11_19350 (truB)
Enzymes [BR:
rrf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
F11_19350 (truB)
Transfer RNA biogenesis [BR:
rrf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
F11_19350 (truB)
Prokaryotic type
F11_19350 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AEO50330
LinkDB
All DBs
Position
4333312..4334238
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AA seq
308 aa
AA seq
DB search
MSRRRRGQAIHGWLAIDKPVGITSTDVVNRLRRTMDAAKVGHGGTLDPLASGVLPIAFGE
ATKTVSYVMDGTKVYHMVVGWGEARDTDDREGKVIDTSDVRPDAQAITAMLARFTGEIEQ
VPPIYSAVKVEGRRSYDLARADQAVELKSRKILIKDLTLLETSTPDFGHFRIVSGKGAYM
RSLARDLALALGTVGHVVALRRLACGPFTAETAISLDMVDALGHDAPHSESLLPIEAALA
DIPAVPLTEAEARRLSQGQPVSLLHLASRTPLNGLAQGETVQALLNGKLVALAKIVEGEI
RPLRVVNL
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagccggcgccggcgcggtcaggcgatccacggctggcttgccatcgacaagcccgtc
ggcatcaccagcaccgatgtggtcaaccggctgcggcggacgatggacgcggccaaggtc
ggccatggcggcacccttgatccgttggccagcggcgttctgcccatcgcctttggcgag
gcgaccaagaccgtgtcctatgtgatggacggcaccaaggtctatcacatggtcgtcggc
tggggtgaagcccgcgataccgacgatcgcgaaggcaaggtcatcgacaccagcgatgtc
cgtcccgatgcccaggcgatcaccgccatgctggcgcgcttcaccggcgagatcgaacag
gtgccgccgatctattcggccgtcaaggtcgaggggcggcgctcctatgatctggcgcgc
gccgatcaggccgtggaattgaagtcgcgcaagatcctgatcaaggatctgacgcttctc
gagacctcgaccccggattttggccatttccgcatcgtttcgggcaagggcgcctatatg
cgctcgctggcccgcgacctggccttggccctgggaacggtcggccatgtcgtcgccctg
cgtcgtctcgcatgcggtccgttcaccgccgaaacggcgatttctctggatatggtagac
gccctcgggcatgatgcgccccattctgaaagcctgcttcccatcgaggccgcgctggcc
gacatcccggccgtgcctttgacggaagcggaggcccgtcgcctgtcccaaggacagccc
gtgtccctcttgcatctggcaagccggacccccctgaacggactcgcccaaggcgaaacc
gttcaggcgctgctcaatggaaaactggtggctttggcaaaaatcgtagagggcgaaatc
cgccccttgcgcgtcgtcaacctctag
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