Rhizobium ruizarguesonis: J3P73_00140
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Entry
J3P73_00140 CDS
T07270
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rrg
Rhizobium ruizarguesonis
Brite
KEGG Orthology (KO) [BR:
rrg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrg03400
]
J3P73_00140 (addB)
Enzymes [BR:
rrg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J3P73_00140 (addB)
DNA repair and recombination proteins [BR:
rrg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
J3P73_00140 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QSZ00968
LinkDB
All DBs
Position
complement(26261..29452)
Genome browser
AA seq
1063 aa
AA seq
DB search
MVERHLPRILTIPAGLPFLKTLATTLCDGRLTPIFRHDADDPLSLAKVTIYLPTRRAVRV
LRSEFVDLLGGRSAILPVIRPLGETDDDSGYFDEALPATIDLAQPLSNTARLLELARLIL
AWRNKLPEIVRHIHSDSPLVAPASPADAIWLAHNLAELIDSIETEDLDWSELSKLDTGDY
AAWWQLTAEFLQIASAFWPERLSELGKSSPARHRNAILRAEASRLSATKPAGPIIIAGST
GSLPATADLIAAVANLPEGVIVLPGLDLSMSEQHWQMVAPEPAPGQHTNPASRSHPQFGL
SSLLKRLKLARDDVALLDTSGADLDRRAEILSRALAPAEATSDWGAWKSDLPGGALSSAF
ADVSLIEAANEREEATAIAIALRLALERPGQDGESRAALITPDRNLARRVMAELSRFGIL
ADDSAGTPLAAMPQGTLLQLLLEAALRPGDPVAIVSLLKHPLARFGLERDALISATEVLE
LLALRGGVVEVDISTLEPLLTHQLAEQALDRHAPQWRKALSPDAAGAAYDLARRVAQATE
PLASALMRHRPEDRGRTVRFTLSEWAERTGRSLEAVAVDPHGNLADLWSNEAGDALAALL
SEVIDTDGQMEADGPQWIDIMAALAAGHAVKPRALSHPRLFIFGTLEARLQSVDTLILGG
LNEGTWPGQTANNPFIPRMMKTEIGLEPPERRIGQLAHDFEMANGTRHLIYSRALRQGST
PTVASRWLQRLLALGGEAFEAELKGRGNRFLQWAGLIDRGDGQTPAQRPSPKPPLALQPK
SYSFSEVGRLRRDPYAIYARRVLRLDPVDAFNRDPGAAERGTLYHKIIDRFIREAHIAGT
PDAAAAMERILSDLFDLERLPPHIDAVWRPRFREVARAFLEWEAGRRHGILKTLTEVRGG
MELEPINIRLTGVADRIDITGPNSADIIDYKTGYNPSPAQARVLLDPQLALEAAALSAGA
FRDAGSLVPQDLLYVRLRPGSRFQVDTVNNESSARSDKAKSAMDLAAESIDQLVKFVGLL
QSNERGFTSRLIPAQQFDFGGDYDHLARVSEWSTAETEEGGDE
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggtggagcggcacctgccacgcatcctgacgatcccggcgggcctccccttcctgaaa
acgctggcgacgacgctttgcgacggccgattgacgccgattttccggcatgacgccgat
gatccgctatcgcttgccaaagtaacgatctacctgccgacccggcgtgccgtgcgtgtg
ctgcggtccgaattcgtcgacctgctcggcggccgctcagcgatcctcccagtcatccgc
ccgctcggcgaaaccgatgacgatagcggctatttcgacgaggcgctgccggcaacgatc
gatctcgcccagccactgtcgaataccgcccgtctgttggagcttgcgcgtctgatcctc
gcctggcgaaacaagctgccggagatcgtccgccacattcattcagactcgccgctggtt
gctcccgcaagtccggcggatgcgatctggctcgcccacaaccttgcggagctgatcgat
tccatcgagaccgaggatctcgattggtcggaactgtcgaaactcgacaccggcgattat
gccgcctggtggcagttgacggcggagttcctgcagatcgccagcgccttctggcccgaa
cggctgtccgaactcggcaaatcctcgccggcgcggcacagaaacgccattctccgggcc
gaagcaagccggctttcggcgacgaaacccgctggaccgatcatcatcgccggttcgact
ggctcccttcccgccaccgccgatctcatcgccgccgtcgccaatctgcccgaaggcgtg
atcgtgcttccgggtctcgatctctccatgtccgagcagcactggcaaatggtcgcgccg
gaaccggcgccaggccaacataccaatcccgcaagccgaagccatccgcagtttggcctg
tcgtcgctgctcaagcggctgaagctggcgcgtgacgacgtcgcgctcctcgacacatcg
ggagccgatcttgaccggcgcgccgaaatcctgtctcgggccctcgccccggcggaggcg
accagtgattggggggcctggaagagcgatctgccggggggcgccctgtcttcagccttc
gccgatgtttcgttgatcgaagccgccaacgagcgcgaggaagcaaccgcgattgcgatc
gcgctccggctggcactggagaggccgggacaggacggcgagagccgggcagcactcatc
accccggaccgcaatctcgcccggcgggtcatggccgagctttcccgcttcggcatcctc
gccgatgattcggcgggtacaccgcttgcggccatgccgcaaggcaccttgctgcaattg
ctgctcgaggcagcgctgcgaccgggcgatccggtagcgatcgtctctttgctcaaacat
ccgcttgcccgcttcggcctggaacgcgacgcactgatttccgctaccgaagtcctggag
ctgctggcgctgcgcggcggcgtggtcgaggtggacatcagcacgctcgagccgctgctc
actcaccaacttgccgaacaggcgctggacaggcacgcgccgcaatggcgaaaggcgctt
tcgcccgatgcagccggcgccgcatacgaccttgcccggcgggtcgcacaggcgaccgag
ccgctggcttcggcgctgatgcggcaccggccggaagatcgcggaagaacagtgcgcttc
acattgtccgaatgggccgagcgcaccggccgttcgctggaagcggtcgcggtcgatccg
cacggcaatctcgccgatctctggtcgaatgaagcgggagatgcactcgccgccctgctc
agtgaagtgatcgacacggacggccagatggaggccgacggaccgcaatggatcgacatc
atggccgcacttgccgccggtcatgcggtgaagccacgagcgctcagccatcccaggctc
ttcatcttcggcacgctggaagcccgcctgcagagcgtcgatacgctgattctcggcgga
ctgaacgagggcacctggccagggcagaccgccaataatcccttcattccgcgcatgatg
aagacggagatcggcctcgagccgccggaacggcgcatcggccagctggcgcatgatttc
gagatggcgaacggcacgcgccatctgatctattcgcgcgcactgcgccagggctcaacc
ccgactgtcgcctcgcgttggctgcagcggctgctggcgctcggcggagaagcgttcgaa
gcggaattgaagggacgcggcaaccggtttctgcagtgggccggtctcatcgatcgggga
gatgggcagacgccggcgcagcgaccctcgccgaaaccgccgctggcactgcagccgaaa
tcctattccttcagcgaagtcggccggctgcgccgtgatccctatgccatctatgcccgc
cgtgtcctgcggcttgacccggtcgacgcgttcaaccgcgatccaggggcggccgaacgc
ggaacgctctaccacaagatcatcgaccggtttatccgcgaggctcacatcgccgggacg
cctgatgcggcagcggcgatggagcgcatcctttctgatcttttcgaccttgagcggctg
ccaccgcatatcgatgccgtgtggcgaccgcgctttcgcgaggtggcccgcgccttcctc
gaatgggaggccggacggcgacatggcatcctgaagacgctgacggaagtacggggcggc
atggagctggagccgatcaatatccggctcactggcgtcgcagaccggattgacataaca
ggaccaaactcagcagacatcatcgactacaagaccggctacaatccctcgccggcgcag
gcgcgtgtgcttctcgatccgcagcttgcgctcgaagcggcagccttgagtgccggcgcc
ttccgcgatgccggcagcctggtgccgcaggatcttctctatgtgcgtctgcgacccggg
agccgcttccaagtcgataccgtcaacaacgagagctctgcccgcagcgacaaggcgaaa
tcggcgatggatctcgccgccgaatcgatcgaccagctggtcaagttcgtaggattgctg
caatccaacgaaaggggctttacctcgcggctgatcccggcccagcaattcgatttcggc
ggcgactacgatcatcttgcccgcgtctccgaatggtcgacggccgaaacggaagagggc
ggtgatgagtga
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