Rhizobium ruizarguesonis: J3P73_02410
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Entry
J3P73_02410 CDS
T07270
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
rrg
Rhizobium ruizarguesonis
Pathway
rrg02020
Two-component system
rrg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rrg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
J3P73_02410 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
J3P73_02410 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rrg03021
]
J3P73_02410 (rpoN)
Transcription machinery [BR:
rrg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J3P73_02410 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
PP_kinase_C
Motif
Other DBs
NCBI-ProteinID:
QSZ01390
LinkDB
All DBs
Position
495809..497368
Genome browser
AA seq
519 aa
AA seq
DB search
MALSANLFLRQTQSLVMTPQLMQSIQLLQMTHFELTQFIAQEVEKNPLLEFPSNDGEGGG
ERGESEDGEYAHQPEDAGSDDGYDNRTEALSSDWYDNGGSASTSRLNDELDANYTNVFPD
DGAPQRLDAPELVSQWKSMPGSGEGADYDLDDFVAGQVSLRDHLAQQIPFVLPDMADRLI
AQNFVDQLDDCGYLQADIVEAGERLGTSLAQAERVLATLQSLDPPGVFARSLAECLAIQL
RQKDRYDPAMQALVENLELLARRDFATLKRLCGVDEEDLLDMLGEIRQLNPKPGSGFEAG
VSEAIMPDVVVRASSEGGWLVELNPDTLPRVLVNQSYFSRVTRNGEDHAFLSDCLQSANW
LTRSLDQRAKTIMKVASEIVRQQDAFLLHGVDYLRPLNLKTVAEAIKMHESTVSRVTSNK
YMLTPRGLFELKYFFTVSISAVAGGDSHSAEAVRHKIRALILQESPEAVLSDDDIVDMLK
KGGVDLARRTVAKYREAMNIASSVQRRREKRALAKVAGF
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggcactgtccgccaatcttttcctgcgccagacccagtccctggtgatgacaccgcaa
ctgatgcaatccatccagttgctgcagatgacgcattttgaactcacccagttcatcgcc
caggaagtcgagaagaacccgctgctcgaatttccgtcgaatgacggcgaggggggcggc
gaacgcggcgaatccgaagatggcgagtatgctcatcagccggaagatgccgggtcggat
gacggttacgacaaccggaccgaggcgctttccagcgactggtatgacaatggcggcagc
gccagcacgagccggctgaacgacgaactcgacgccaattacaccaatgtctttccagat
gacggtgccccgcagcgcctcgatgcgccggagctcgtcagccagtggaaatcgatgccg
ggcagcggcgagggcgccgattacgatctcgatgatttcgtcgccggccaggtgtcgctg
cgtgatcatcttgcccagcagatccccttcgtcctgcctgacatggccgaccggctgatc
gcgcagaattttgtcgaccagctcgacgactgcggttatctgcaggccgatatcgtcgag
gcgggcgagaggctgggcacgagcctcgcacaggccgagcgtgtgcttgccaccctccag
agcctcgatccgccgggtgttttcgcccgcagcctcgccgaatgcctggcgatccagctc
aggcagaaggaccgatatgaccccgccatgcaggctctggtcgaaaacctcgaactcctg
gcgcggcgcgattttgccacgttgaagcggctctgcggcgtcgacgaggaagatcttctc
gacatgctcggcgagatccgccagctcaatcccaagccgggcagcggtttcgaggcgggt
gtttccgaagcgatcatgccggatgtggtcgtcagagcctcctccgagggcggctggctg
gtcgagctcaatccggatacgctgccgcgcgtgctggtcaaccagtcctatttttcccgc
gtgacccgcaatggagaggatcacgccttcctctccgattgcctgcagagcgccaactgg
ctgacccgcagcctcgaccagcgggcaaaaaccatcatgaaggtggcaagcgaaatcgtc
cgccagcaggacgccttcctgctgcatggcgtcgactacctgcgcccgctgaacctgaaa
acggtcgccgaggcgatcaagatgcatgaatccacagtcagccgcgtcacgtcgaacaaa
tatatgctgacgccgcgcggcctcttcgaactcaaatatttcttcaccgtctcgatcagc
gccgtcgctggcggcgatagccattcggccgaggccgtgcgtcacaagatccgtgcgctg
atcctgcaggagagcccggaggcggtgctttccgacgacgatatcgtcgacatgctgaaa
aagggcggcgtcgatcttgcccgccgcacggttgcgaaataccgggaggccatgaacatc
gcttcttcggtgcagcgccgtcgcgagaagcgagcgctcgccaaggtcgccggcttctga
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