Rhizobium ruizarguesonis: J3P73_02485
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Entry
J3P73_02485 CDS
T07270
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rrg
Rhizobium ruizarguesonis
Pathway
rrg00300
Lysine biosynthesis
rrg01100
Metabolic pathways
rrg01120
Microbial metabolism in diverse environments
rrg01230
Biosynthesis of amino acids
Module
rrg_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rrg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
J3P73_02485 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rrg01002
]
J3P73_02485 (dapE)
Enzymes [BR:
rrg01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
J3P73_02485 (dapE)
Peptidases and inhibitors [BR:
rrg01002
]
Metallo peptidases
Family M20
J3P73_02485 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
QSZ01404
LinkDB
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Position
complement(511832..513025)
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AA seq
397 aa
AA seq
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MTATDPVANLQTLIRCPSVTPAEGGALSALEAMLAPLGFTVDRVKASEERTPDIENLYAR
LGKDGPHLMFAGHTDVVPVGDEAAWTHPPFEAQISKGELFGRGAVDMKGGIACFVAAVAR
HIEKNGQPKGSISFLITGDEEGPAINGTIKLLQWAAERGERWDACLVGEPTNPDRLGDMI
KIGRRGSLSGRITVHGVQGHAAYPHLADNPVRGMLQLTQALMDPPFDGGTDDFQPSNLEV
TTVDVGNPATNVIPAKASASFNIRFNDSWTVEALRAEILRRLDAAARDGALRPSRDPVKY
DIVWADRPSHVFLTRNNALIASLSSAVESISGQSPRLSTTGGTSDARFIKDYCPVVEFGL
VGQTMHMVDERVAVADLETLTAIYETFIARWFANAGL
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctaccgaccccgtcgccaatcttcagacgctgattcgctgcccgtccgtgacg
cccgccgaaggcggcgcgctgtcggcgctggaggcaatgcttgcgccgctcggctttacg
gtcgacagagtgaaggcgagcgaagagcgaacacctgacattgaaaacctctatgcccgc
ctcggcaaggacggcccgcacctgatgtttgccggccataccgatgtcgtgccggtcggc
gacgaagccgcctggacgcatccgccctttgaggcccagatttcgaagggcgaacttttc
ggccgcggcgccgtcgacatgaagggcggcattgcctgtttcgtcgccgcggtcgcccgc
catatcgagaaaaacgggcagcccaagggctcgatttcctttctcatcaccggcgacgaa
gaaggtccggcgatcaacggcacgatcaaactgctgcaatgggcagccgagcgcggtgag
cgctgggatgcctgcctggtcggggagccaaccaatccggacaggctcggcgacatgatc
aagatcggccggcgtggctcgctgtcgggcaggatcaccgtacacggcgtgcagggccat
gccgcctatccgcaccttgccgacaatccggtgcgcggcatgctgcagctgacgcaggcg
ctgatggacccgccgtttgacggcggcaccgacgatttccagccgtcgaacctcgaagtg
accacggtcgatgtcggcaacccggcgaccaacgtcattccggccaaggcgtcggcgagt
ttcaacatccgcttcaacgacagctggaccgtcgaagcactgcgtgccgaaatcctgcgc
cgtcttgacgccgctgcccgggacggcgcgctgcggccgagccgcgacccggtgaaatac
gatatcgtctgggccgaccggccgagccatgttttcctgacgcgcaacaatgcgctgatc
gcctcgctgtcttcagccgtcgaaagcatttccggccaatcgccgcggctttcgaccacc
ggcggcacatcggatgcgcgcttcatcaaggattattgcccggtcgtcgagttcggcctc
gtcggccagacgatgcacatggtcgacgagcgcgtcgctgtcgccgatctggagacgctg
acggcgatctatgaaaccttcatcgcccgctggttcgccaatgccgggctttag
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