KEGG   Rhizobium ruizarguesonis: J3P73_03480
Entry
J3P73_03480       CDS       T07270                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
rrg  Rhizobium ruizarguesonis
Brite
KEGG Orthology (KO) [BR:rrg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rrg03400]
    J3P73_03480
Enzymes [BR:rrg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     J3P73_03480
    5.6.2.6  RNA 3'-5' helicase
     J3P73_03480
DNA repair and recombination proteins [BR:rrg03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    J3P73_03480
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 PSD4 MRB1590_C
Other DBs
NCBI-ProteinID: QSZ01583
LinkDB
Position
715414..717924
AA seq 836 aa
MDQIDSEARTLLPAAFTRWFAEKGWRPRAHQLELLARAEAGESTLLIAPTGAGKTLAGFL
PSLTDLTRRGRIPPGSAFTGIHTLYVSPLKALAIDIERNLMKPVAEMGLPVTVENRTGDT
PNAKRQRQKLSPPDILLTTPEQVALLLANREAERFFKDLKYIVLDELHSLVTSKRGHMLS
LGLARLRRLAPGLQTIGLSATVAEPMDLQKWLVGQEEGSEHYAGLVVVEGGAKPDISILS
TEEHIPWSGHSARYAIPDVYRHLVEHRTTLLFVNTRSQAEMLFQALWTINDDNLPIALHH
GSLDVAQRRKVEAAMAENRLRAVVATSTLDLGIDWGDVDLVIHVGAPKGASRLAQRIGRA
NHRMDEPSKAILVPANRFEVMECQAALDANYIGAQDTPPVGRGALDVLAQHVLGMACAEP
FDMLELYDEVTSASPYADLSWETFERIVDFVATGGYALRTYERYARIRKTGEGRWRVSNP
AVAQQYRLNLGTIVESPMLNIRMVKRGEGGRIGRGGATLGKVEEYFLEQMSPGDTFIFSG
KVLRFEGIRENECLASQAFSLDPKIPSYNGGKFPLSTYLAEQVRAMIADPDRWRRLPDQV
RDWLSLQNDKSMLPKRDEFLIETFPRGSRGYMVAYPFEGRLAHQTLGMLLTRRLERIGAK
PLGFVATDYSLAIWGLEDMGLMIRNGRLSLSDLFDEDMLGDDLEAWLDESFLLKRTFRNC
AVIAGLIERRHPGKEKSGRQITVSADLIYDVLRSHEPDHILLQATRQDAATGLLDIGRLG
DMLRRIRGHITHRALDHISPLAVPVMLEIGREAVPGEAHDALLAEAADDLIAEALA
NT seq 2511 nt   +upstreamnt  +downstreamnt
gtggaccagatcgattccgaagcccgcacactgcttcctgctgcctttacccgctggttt
gcggaaaagggctggcgcccgcgcgcccatcagctggaactgctcgcccgcgccgaggcc
ggcgaaagcacgctgctgattgcgccgaccggcgccggcaagacgctcgccgggtttctg
ccgtcgctcaccgatctcacccgccgcggccggataccgcccggctccgccttcaccggc
atccacaccctctatgtctcgccgctgaaggcgcttgccatcgatatcgagcgcaatctg
atgaaaccggttgcggagatgggcctgccggtcaccgtcgaaaatcgcaccggcgacacg
ccgaacgccaagcgccagcgccagaaactcagcccgccggatattctgctgacgacgccg
gaacaggtcgccctgctgctggcgaaccgcgaggccgagcgcttcttcaaggacctgaaa
tatatcgtcctcgacgagctgcattcgctggtcacctccaagcgcggccacatgctttcg
ctcggccttgcccgcctgcgccgccttgcccccggcctccagaccatcggcctgtcggcc
accgtcgccgaacccatggatctgcagaaatggctggtcggccaggaagagggtagcgaa
cattatgccggcctcgttgtcgtcgaaggcggcgccaagcccgatatctcgattctttcg
accgaagagcacattccctggtccggccattccgcccgatatgccattcccgatgtctac
cggcatcttgtcgaacatcgcacgacgctgctcttcgtcaacacccgcagccaggccgaa
atgcttttccaggcactctggacgatcaatgacgacaacctgccgatcgcgctccaccac
ggctccctcgatgtcgcccagcgccgcaaggtcgaggcggcgatggccgaaaaccggctg
cgcgccgtcgttgccacctccactctcgatctcggcatcgactggggcgatgtcgatctc
gtcatccatgtcggcgcgccgaagggcgcctcgcgtcttgcccagcgcatcggccgcgcc
aatcaccgcatggacgagccctcgaaggcgatcctggttcccgccaaccgtttcgaggtc
atggagtgtcaggccgccctcgatgccaattatatcggcgcgcaggataccccgcccgtc
ggccgcggcgcgctcgacgtgctcgcccagcatgtgctaggcatggcctgcgccgagcct
ttcgacatgctggaactctacgatgaggtcaccagcgcctcgccctatgccgatctcagc
tgggagaccttcgagcgcatcgtcgatttcgtcgcgaccggcggttatgcgctccgcacc
tacgagcgttacgcccgcatccgcaagaccggggagggccgctggcgcgtctccaatcct
gcggtcgcccagcaataccgcctcaacctcggcaccatcgtcgaaagcccgatgctgaat
atccgcatggtcaagcgcggcgagggcggcaggatcggccgtggcggcgccacgctgggg
aaggtcgaggaatatttcctcgagcagatgtcgcccggcgatactttcatcttctccggc
aaggtgctgcgcttcgagggcattcgcgaaaatgagtgccttgcctcgcaggccttttcg
ctcgatccgaagatcccgtcctataatggcggcaagtttccgctgtcgacctatctggcc
gagcaggtgcgggcgatgatcgccgatcccgatcgctggcgccgcctgccggatcaggtg
cgcgactggctgtcgctgcagaacgacaagtcgatgctgccgaagcgcgacgagttcctg
atcgaaacctttccgcgcggcagccgcggctacatggtcgcctatcccttcgaaggccgt
ctcgcccaccagacgctcggcatgctgctgacccgccggctggagcggataggcgccaaa
ccgctcggtttcgtcgccaccgattattcgcttgccatctggggcctcgaggatatgggg
ctgatgatccgcaacggccggctcagcctctccgacctcttcgacgaagacatgctcggc
gacgatctcgaagcctggctggacgaatccttcctgttgaagcgcactttccgcaattgc
gccgtgattgcaggcttgatcgagcgccgccatccgggcaaggaaaagagcggccggcag
atcaccgtctccgctgacctgatctacgacgtgctgcgcagccacgaaccggatcacatc
ctcctgcaggcaacgcggcaggatgcggcgacgggacttttggatattggccgtcttggc
gatatgctgagacgaatcaggggccacatcacccaccgcgccctcgaccatatttccccg
ctcgccgtgccggtgatgctggaaatcggacgcgaggcggtgccgggcgaggcccatgac
gcactcctggccgaagcggcggatgatctgatcgccgaagcgttggcctga

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