Rhizobium ruizarguesonis: J3P73_03610
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Entry
J3P73_03610 CDS
T07270
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rrg
Rhizobium ruizarguesonis
Pathway
rrg03420
Nucleotide excision repair
rrg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rrg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J3P73_03610
03430 Mismatch repair
J3P73_03610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrg03400
]
J3P73_03610
Enzymes [BR:
rrg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J3P73_03610
DNA repair and recombination proteins [BR:
rrg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J3P73_03610
MMR (mismatch excision repair)
Other MMR factors
J3P73_03610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
RecR_HhH
HHH
Motif
Other DBs
NCBI-ProteinID:
QSZ01607
LinkDB
All DBs
Position
complement(748700..750757)
Genome browser
AA seq
685 aa
AA seq
DB search
MYLEKLNPQQRMAVEHGTLIDGTHIAGPLLVIAGAGSGKTNTLAHRVAHLIVKGADPRRI
LLMTFSRRAAAEMARRVERICRDVLGSNAGVMADALSWSGTFHGIGARLLRDYAQQIGLD
PDFTIHDREDSADLMNLIRHDLGFSKTESRFPTKGTCLAIYSRAVNSETALDLVLRDVFP
WCATWEKQLRELFASYVEAKQSQNVLDYDDLLLYWAQMVGETVIAEDIGSRFDHVLVDEY
QDTNRLQASILLALKPQGQGLTVVGDDAQSIYSFRAATVRNILDFPAAFSPAANIVTLDR
NYRSTQPILAAANAVIDLASERFTKNLWTERQSSERPRLVTVRDEAEQARYITDMVLDNR
EEGLTLKQQAVLFRTSHHSGPLEVELTRRNIPFVKFGGLKFLDSAHVKDMLAVLRFAQNP
RDRVAGFRLMQILPGVGPSTAQKALDLMAEDASPISALAAMPAPPRSGEDWTDFVAMLQE
LKSGKAGWPAEIGLARQWYAPHLERLHEDATTRQADLLQLEQIGSGYASRERFLTELTLD
PPDATSDQAGVPLLDEDYLILSTIHSAKGQEWTKVFMLNVVDGCIPNDLAVGTTAEIEEE
RRLFYVAMTRARDGLDLVVPQRFFTYGQNSQGDRHVYASRSRFIPATLLQFFEACSWPQG
KSEAAQAQARQVRIDVGARMRGMWR
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgtatctcgaaaagctcaatccgcagcagcgcatggccgtcgagcacggcacgctcatc
gacggcacccatattgccgggccgctgctggtcattgccggcgccggctccggcaagacg
aataccttggcgcatcgggtcgcccatctcatcgtcaaaggcgccgatccccgccgcatc
cttttgatgaccttttcgcgccgggcagccgccgagatggcgcgacgcgtcgagcgcatc
tgccgcgatgtgctgggttcgaatgccggcgtcatggcggatgcgctttcctggtccggc
acctttcacggcatcggcgcgcggctgttgcgcgattatgcccagcagatcggccttgat
cccgatttcaccatccacgaccgcgaagacagcgccgatctgatgaacctcatccggcac
gacctcggcttctccaagacggaaagccgctttccgacaaagggcacctgccttgccatc
tattccagggcggtgaattcggaaaccgcgctcgacctcgtgttgcgcgacgtctttccc
tggtgcgcgacgtgggagaaacagctgcgcgaacttttcgccagttatgtcgaggccaag
cagagccagaacgtgctcgactacgacgatctgctgctctactgggcgcagatggtcggc
gagactgtcattgccgaggatatcggcagccgcttcgaccatgtgctggtcgacgaatat
caggacaccaaccggctgcaggcctcgatcctgctggcgctgaaaccccaaggccagggg
ctgaccgtggtcggcgacgatgcgcagtcgatctattccttccgtgccgcgacggtgcgc
aacatcctcgattttcccgccgccttcagcccggccgccaatatcgtcacgctcgaccgc
aactaccgctcgacgcagccgatcctcgccgccgccaacgccgtcatcgatctcgcctcg
gagcgcttcaccaagaacctctggaccgagcggcaatcatccgagcggccgcgcctggtc
acggtgcgcgacgaggccgagcaggcgcggtatatcaccgacatggtgctcgacaatcgc
gaggaaggcctcacgctcaagcagcaagccgtgctcttccgcacctcgcatcacagcggg
ccgctggaggtcgagctgacccggcgcaatattcccttcgtcaagttcggcgggctgaag
tttctcgacagcgcgcatgtgaaggacatgctggccgtccttcgcttcgcgcagaacccg
cgcgaccgggtggcgggcttccggctgatgcagatcctgccgggtgtcgggccgtccacg
gcgcaaaaggcgctcgacctgatggccgaggatgccagcccgatctctgctcttgccgcc
atgccggcgccgccgcgctccggcgaggactggactgatttcgttgccatgctgcaggag
ttgaagtcgggcaaggccggctggccggcggaaatcggcctggcacggcaatggtacgcg
ccgcatctggaacggcttcatgaggacgcaacgacgcggcaggccgatctgctgcagctc
gagcagatcggcagcggttacgcctcgcgcgagcgctttctgaccgaactcaccctcgat
ccgccggatgcgaccagcgaccaggcgggcgtgccgcttctcgacgaggactatctcatc
ctttccaccatccattccgccaagggccaggaatggacgaaggtgttcatgctgaacgtc
gtcgacggctgcatcccgaacgatctcgctgtcggcaccaccgccgaaatcgaggaggaa
cgccggctgttctatgtcgcgatgacgcgcgccagggatggtctcgacctcgtcgtgccg
caacgcttcttcacctacgggcagaactcacagggcgaccggcatgtctatgcctcacgc
agccgcttcattcccgcgaccctgctgcagttcttcgaagcctgcagctggccgcagggg
aaatcggaggccgctcaagcgcaggcgcgacaggtgcgcatcgatgtcggcgcccgcatg
cgcggcatgtggcgataa
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