Rhizobium ruizarguesonis: J3P73_09465
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Entry
J3P73_09465 CDS
T07270
Symbol
hupB
Name
(GenBank) DNA-binding protein HupB
KO
K03530
DNA-binding protein HU-beta
Organism
rrg
Rhizobium ruizarguesonis
Brite
KEGG Orthology (KO) [BR:
rrg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rrg03032
]
J3P73_09465 (hupB)
03036 Chromosome and associated proteins [BR:
rrg03036
]
J3P73_09465 (hupB)
03400 DNA repair and recombination proteins [BR:
rrg03400
]
J3P73_09465 (hupB)
DNA replication proteins [BR:
rrg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
J3P73_09465 (hupB)
Chromosome and associated proteins [BR:
rrg03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
J3P73_09465 (hupB)
DNA repair and recombination proteins [BR:
rrg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
J3P73_09465 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
QSZ02682
LinkDB
All DBs
Position
1911189..1911464
Genome browser
AA seq
91 aa
AA seq
DB search
MNKNELVSAVAEKAGLTKSDAASAVDAVFDVVQAELKNKGDIRLAGFGSFTVSHRAATKG
RNPSTGAEVDIPARNVPKFTPGKGLKDAVNG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaatgaactcgtgtccgcagtagccgaaaaggcaggactgacgaagtctgac
gcggcttccgctgttgacgcggttttcgacgttgtccaggctgaactcaagaacaagggc
gacattcgcctcgcgggtttcggcagcttcaccgtttctcatcgtgccgcaacgaagggc
cgtaacccgtcgacgggcgctgaagtcgacattccggctcgcaacgtgccgaaattcacg
cccggcaagggcctgaaggacgccgtcaacggctga
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