Rhizobium ruizarguesonis: J3P73_10240
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Entry
J3P73_10240 CDS
T07270
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rrg
Rhizobium ruizarguesonis
Pathway
rrg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rrg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J3P73_10240 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrg03400
]
J3P73_10240 (xth)
Enzymes [BR:
rrg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
J3P73_10240 (xth)
DNA repair and recombination proteins [BR:
rrg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
J3P73_10240 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
TetR_C_31
RuBisCO_small
Motif
Other DBs
NCBI-ProteinID:
QSZ02822
LinkDB
All DBs
Position
complement(2066978..2067772)
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AA seq
264 aa
AA seq
DB search
MKIATYNVNGINGRLDILLRWLKEDAPDVVCLQELKADDARFPRKEIERAGYGAIWHGQR
SWNGVAILAKGKIPILTRRGLPGDPDDTHSRYIEAAVDGILIGCLYLPNGNPFPGVKFDY
KLRWFLRLQAYAAELLELDVPSILAGDFNVMPTEIDVYKPERWLDDALFRPEVRKAYADL
VAQGWTDAVRHLHPEERVYTFWKYWRNSFERDAGLRIDHFLLSPAVAPWLRSATVRKKPR
GWEHTSDHAPVMIELDVSKAGADL
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatcgcaacctacaatgtcaacgggatcaatgggcggctagacattctgctgcgc
tggctcaaggaggacgcccctgatgtggtctgcctccaggaactgaaggcagacgatgcc
aggtttccgcgaaaggaaatcgagcgggccggctacggcgccatctggcacggacagaga
tcctggaacggggttgcgatcctggcaaaaggcaagataccgatcctgacgcggcgtggt
cttcccggtgatcctgacgatactcacagccggtatatcgaagctgccgtcgacggcatc
ctgatcggatgcctgtatcttcccaacggcaatccgtttccaggagtaaaattcgattac
aagctgcgctggtttctccgtctgcaggcgtacgccgccgaactcctcgagctcgatgtg
ccttcgatcctggccggcgacttcaacgtcatgccgacggagatcgacgtctacaagccg
gaacgctggctggacgacgccctcttcaggccggaagtgcgcaaggcctatgctgatctc
gttgcccagggttggaccgatgccgtcagacatctgcatccagaagagcgcgtctacacc
ttctggaaatactggcggaacagcttcgaacgtgacgcggggcttcggatcgaccacttc
ctgctcagtccggcagtcgccccatggcttcgatcggcaaccgtccggaaaaaaccgcgc
ggctgggagcatacgagcgaccacgcgcccgtcatgatcgagctcgacgtttccaaagct
ggagcagacctatga
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