KEGG   Rhizobium ruizarguesonis: J3P73_11535
Entry
J3P73_11535       CDS       T07270                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rrg  Rhizobium ruizarguesonis
Pathway
rrg00010  Glycolysis / Gluconeogenesis
rrg00020  Citrate cycle (TCA cycle)
rrg00260  Glycine, serine and threonine metabolism
rrg00280  Valine, leucine and isoleucine degradation
rrg00310  Lysine degradation
rrg00380  Tryptophan metabolism
rrg00620  Pyruvate metabolism
rrg00630  Glyoxylate and dicarboxylate metabolism
rrg00640  Propanoate metabolism
rrg00670  One carbon pool by folate
rrg00785  Lipoic acid metabolism
rrg01100  Metabolic pathways
rrg01110  Biosynthesis of secondary metabolites
rrg01120  Microbial metabolism in diverse environments
rrg01200  Carbon metabolism
rrg01210  2-Oxocarboxylic acid metabolism
rrg01240  Biosynthesis of cofactors
Module
rrg_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rrg_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rrg_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rrg_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rrg00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    J3P73_11535 (lpdA)
   00020 Citrate cycle (TCA cycle)
    J3P73_11535 (lpdA)
   00620 Pyruvate metabolism
    J3P73_11535 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    J3P73_11535 (lpdA)
   00640 Propanoate metabolism
    J3P73_11535 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    J3P73_11535 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    J3P73_11535 (lpdA)
   00310 Lysine degradation
    J3P73_11535 (lpdA)
   00380 Tryptophan metabolism
    J3P73_11535 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    J3P73_11535 (lpdA)
   00670 One carbon pool by folate
    J3P73_11535 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rrg04147]
    J3P73_11535 (lpdA)
Enzymes [BR:rrg01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     J3P73_11535 (lpdA)
Exosome [BR:rrg04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   J3P73_11535 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 FAD_binding_3 FAD_oxidored HI0933_like NAD_binding_8 GIDA DAO Thi4 Lys_Orn_oxgnase Amino_oxidase AlaDh_PNT_C 2-Hacid_dh_C 3HCDH_N XdhC_C ANAPC4_WD40
Other DBs
NCBI-ProteinID: QSZ03051
LinkDB
Position
2314230..2315696
AA seq 488 aa
MAESYDVIIIGSGPGGYVAAIRASQLGLKTAIVEREHMGGICLNWGCIPTKALLRSAEVL
DHANHFKDYGLVLEGTVKPDAKAVVGRSRAVSARLNAGVGFLMKKNKIDIIWGEAKITKA
STGTQAGEIVVGKSSKPVVEPQHPLPKNVKSGEGTYTAKHIIIATGARPRALPGIEPDGK
LIWTYFEALKPDVLPKSLIVMGSGAIGIEFASFYRSMGVDVTVVEVMPTIMPVEDAEITA
IARKQLEKRGLKIFTSAKVSKVDKATNSVTAHVETADGKVQQITADRLISAVGVQGNIEN
LGLEALGVKTDRGCVVIDGYGKTNVAGIYAIGDVAGPPMLAHKAEHEGVVCVEKIAGLPN
VHPTDKGKVPGCTYCNPQVASVGITEAKAKEQGRDIRVGRFSFAANGKAIALGEDQGMVK
VIFDKKTGELLGAHMVGAEVTELIQGFVVAMNLETTEEELMHTIFPHPTVSETMKEAVLD
AYGRVLNA
NT seq 1467 nt   +upstreamnt  +downstreamnt
atggctgaatcctacgacgtcatcatcatcggctccggtcccggcggctatgtcgccgcc
atccgcgccagccagctcggtcttaagaccgcgatcgtcgagcgcgagcatatgggaggc
atctgcctgaactggggctgcatcccgaccaaggcgctgctgcgctcggccgaggtgctc
gaccacgccaatcacttcaaggattacggcctcgttctcgaaggcacggtcaagccggat
gccaaagccgtcgtcggccgctcgcgcgccgtctccgcccgcctgaatgccggcgtcggc
ttcctgatgaagaagaacaagatcgacatcatctggggcgaagcgaagatcaccaaggct
tcgaccgggacccaggcgggcgagatcgtcgtcggcaagtcgtcgaagccggtcgtcgag
ccgcagcatccgctgccgaagaacgtcaagagcggcgagggcacttataccgccaaacac
atcatcatcgctaccggcgcccgcccgcgcgcgctgcccggcatcgagccggatggcaag
ctgatctggacctatttcgaggcgctgaagccggacgtgctgccgaagtcgctgatcgtc
atgggttccggcgcgatcggcatcgaattcgccagcttctatcgctcgatgggcgtcgat
gtgaccgtcgtcgaagtcatgccgaccatcatgccggtcgaggatgccgagataacggcg
atcgcccgcaagcagcttgaaaagcgcggcctcaagatcttcaccagcgccaaggtctcg
aaggtcgacaaggccacgaacagcgttaccgcccatgtcgagacggccgatggcaaggtg
cagcagatcactgccgaccggctgatttcggccgtcggtgttcagggcaatatcgaaaac
ctcggtctcgaggcgctcggcgtcaagaccgaccgcggctgcgtcgtcatcgacggctac
ggcaagaccaatgtcgccggcatctatgcgatcggcgatgtcgccggcccaccgatgctg
gcgcacaaggcagagcatgagggcgtcgtctgcgtcgaaaagatcgccggcctcccgaac
gttcatcccacagacaagggcaaggtcccgggctgcacctattgcaatccgcaggtcgcc
tccgtcggcatcaccgaagccaaagccaaggagcagggccgcgacatccgcgtcggtcgc
ttctccttcgcggcaaacggcaaggcgatcgcgctcggcgaagaccagggcatggtgaag
gtgatcttcgacaagaagaccggcgagctcctcggcgcccacatggtcggcgccgaagtc
accgaactcatccagggcttcgtcgtcgcgatgaacctcgaaacgaccgaggaagagctg
atgcacacgatcttcccgcatcccaccgtgtccgaaacgatgaaggaagcggtgctagat
gcctacggccgtgtgctgaacgcttga

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