Rhizobium ruizarguesonis: J3P73_16740
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Entry
J3P73_16740 CDS
T07270
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rrg
Rhizobium ruizarguesonis
Pathway
rrg03420
Nucleotide excision repair
rrg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rrg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J3P73_16740
03430 Mismatch repair
J3P73_16740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrg03400
]
J3P73_16740
Enzymes [BR:
rrg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J3P73_16740
DNA repair and recombination proteins [BR:
rrg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J3P73_16740
MMR (mismatch excision repair)
Other MMR factors
J3P73_16740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
DUF4420
CarD_TRCF_RID
DUF3553
Motif
Other DBs
NCBI-ProteinID:
QSY99486
LinkDB
All DBs
Position
3364732..3367212
Genome browser
AA seq
826 aa
AA seq
DB search
MSNSFDDMPFFDEEPGEMARKPQPPAAPAESAPAAGGGIAARAMAARDGGKRPDYLAGLN
PEQTEAVETLEGPVLVLAGAGTGKTRVLTTRIAHILNTGRAFPSQILAVTFTNKAAREMK
ERIALLVGGAVEGMPWLGTFHSIGVKLLRRHGELVGLRSDFTILDTDDVVRLIKQIIQAE
GLDDKRWPAKQFAGMIDTWKNKGLGPADIPEGDARAFANGRGRDLYFAYQARLTTLNACD
FGDLLMHPIAIFRKNPDLLKEYHGRFRYILVDEYQDTNTAQYMWLRLLAQRPKGELQNVC
CVGDDDQSIYGWRGAEVDNILRFEKDFPGAKVIKLERNYRSTEHILGAAAHLIAHNEGRL
GKTLFTDRSDPDDVKVQVHASWDSEEEARAIGEEIEQLQRGKHLLNDMAILVRASFQMRE
FEDRFVTLGLNYRVIGGPRFYERLEIRDAMAYFRLVAQASDDLAFERIVNTPKRGLGDTT
VRALHDYARARDIPMLAAAADIIETDELKPKARKALFDVIQSFRRWQELLENTPHTELAE
QILEESGYTDMWKNDKSAEAPGRLENLKELIRSMESFESMRGFLEHVSLVMDAETNENLD
AVSIMTLHSAKGLEFDTVFLPGWEEGLFPHQRSLDESGRAGLEEERRLAYVGITRAKHRC
HIWFVSNRRIHGLWQSTLPSRFLDELPETHVEVAEMEQSYGGYGRGGYGQSRFDKAEPFA
NSYSTPGWKRAQANKSDATRDNWGTRSGHAVERIGYGESGPKGRTIEGELVAKSTSSEPS
RFTPGDRVFHLKFGNGNITGIEGNKLTIEFDRAGQKRVLDGFVERV
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatagtttcgacgatatgcccttcttcgacgaagagccgggcgagatggcgcgc
aagccgcagccgcctgccgcccccgccgaaagcgcgcccgccgccggtggcggcatcgcc
gcccgcgccatggcggctcgcgacggcggcaagcggccggattacctcgccgggctgaac
cccgagcagaccgaagccgtcgaaacgctggaaggccccgtcctcgtgctggccggcgct
ggcaccggcaagacgcgggtgctcaccacccgcattgcccatattctcaacaccggccgc
gccttcccctcgcagatcctcgccgtcaccttcaccaacaaggccgcccgcgagatgaag
gagcgcatcgcgctgctcgtcggcggcgccgtcgaaggcatgccctggctcggcaccttc
cattcgatcggcgtcaaacttctgcgccgccacggcgagctcgtcggcctgcgctccgat
tttaccattctcgataccgacgacgtcgtccgcctgatcaagcagatcatccaggccgag
ggcctcgacgacaagcgctggccggccaagcagttcgccggcatgatcgatacctggaag
aacaagggtctcggccccgccgatatccccgagggcgacgcccgcgcctttgccaatggc
cgcggccgcgatctctattttgcctatcaggcgcgcctgacgacgctgaacgcctgcgat
ttcggcgacctgctgatgcatccgatcgcgatcttccgcaagaaccccgatctcttgaag
gaatatcacggccgcttccgttatatcctcgtcgacgaataccaggacaccaacaccgct
caatacatgtggctcaggcttctcgcccagcgccccaagggcgagctgcagaacgtctgc
tgcgtcggcgacgacgaccagtcgatctatggctggcgcggcgcggaggtcgacaatatc
ctgcgctttgaaaaggattttcccggcgccaaggtcatcaagcttgagcgcaactaccgt
tcgaccgaacatatcctcggcgccgccgcccatctgatcgcccataatgaaggccgcctc
ggcaagacgctgttcaccgaccgctccgatcccgacgacgtcaaggtgcaggtccacgcc
tcctgggattcggaggaggaagcccgcgccatcggcgaggagatcgagcagcttcagcgc
ggcaagcatctgctgaacgacatggcgatcctcgtacgtgcatccttccagatgcgcgaa
ttcgaagaccgcttcgtcactctcggcctcaattaccgcgtcattggtggcccacgcttc
tacgagcgcctggaaatccgcgatgccatggcctatttccgccttgtcgcgcaagcctcc
gacgacctcgcttttgagcgcatcgtcaacacgccgaagcgcggcctcggcgatacgacg
gtgcgcgcgctgcacgactatgcgcgtgcccgcgatattccgatgcttgcggcagccgcc
gacatcatcgagaccgacgagctgaagccgaaggcgcgaaaggcgctcttcgacgtgatt
caatctttccgccgatggcaggagctgcttgaaaacacgccgcataccgaacttgccgag
cagatcctcgaagagtcgggctataccgacatgtggaagaacgacaagagcgccgaagcg
ccgggccgccttgagaacctcaaggaactgatccgctcgatggaaagcttcgagtcgatg
cgcggcttcctcgaacacgtctccctggtgatggatgccgaaaccaacgagaacctcgac
gctgtctcgatcatgacgctgcactcggccaagggcctggaattcgacaccgtcttcctg
cccggctgggaggaaggcctcttcccgcaccagcgctcgctggatgagagcggccgcgcc
ggcctggaggaggaacgccgcctcgcctatgtcggcatcacccgcgccaagcatcgctgc
cacatctggttcgtctccaaccgccgcatccatggcctctggcagtcgaccctgccctcg
cgttttctcgacgaactgccggaaacccatgtcgaggtcgctgaaatggaacagagctac
ggcgggtacggccgcggcggctacggccagtcccgcttcgacaaggccgaacccttcgcc
aattcctattctacgcccggctggaaacgcgcccaggccaacaagagcgacgccacgcgc
gacaattggggaacccgctccggccacgccgtcgaacgcatcggctacggcgagagcggc
ccgaaggggcgcaccatcgaaggtgagctggtggcgaaatcgacatcgtcggaaccgtcg
agattcacccccggcgatcgcgtgttccacctgaaattcggcaacggcaacatcaccggc
atcgagggcaacaagctgacgatcgaattcgaccgggccggacagaagcgggtcttggac
gggttcgtcgagcgcgtctga
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