Rhizobium ruizarguesonis: J3P73_22400
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Entry
J3P73_22400 CDS
T07270
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rrg
Rhizobium ruizarguesonis
Pathway
rrg00300
Lysine biosynthesis
rrg00470
D-Amino acid metabolism
rrg01100
Metabolic pathways
rrg01110
Biosynthesis of secondary metabolites
rrg01120
Microbial metabolism in diverse environments
rrg01230
Biosynthesis of amino acids
Module
rrg_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rrg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
J3P73_22400 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
J3P73_22400 (lysA)
Enzymes [BR:
rrg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
J3P73_22400 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QSZ00539
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Position
4578760..4580028
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AA seq
422 aa
AA seq
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MNHFEYRDGVLHAENVPVPEIAKAVGTPFYVYSTATLERHYRVFSEAFADMDSMVCYAMK
ANSNQAVLKTLGRLGAGIDVVSEGELRRALAADIPANRIMFSGVGKTPSEMDFALEAGIY
CFNVESEPELEILNQRAVSAGKKAPVSFRINPDVDAKTHSKISTGKKENKFGISWERARA
IYAHAAKLPGIEVTGIDMHIGSQITELRPFDDAFKLLHDLVATLRADGHTIHHVDIGGGL
GIPYKDDNNPPPLPDAYAAIVKNQLRGLDCKIITEPGRLIVGNAGILVTEVLYVKDGGEK
TFVIVDGAMNDLIRPTLYEAYHEIRPVTISAANAPRIRADVVGPVCETGDYLALDREMAM
PKPGDLMAVSTAGAYGAVQAGTYNSRLLVPEVLVRGSDFHTIRPRRTYAELISLDSVPAW
LD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccatttcgagtaccgagacggcgtccttcatgccgagaacgtccccgttcccgag
atcgccaaggcggtcggcacacctttctacgtctattccactgcaacgctggagcgccat
taccgcgtcttttcggaagccttcgccgacatggactccatggtctgctatgcgatgaag
gcgaattcgaaccaggcagtgctgaagacgctgggtcgcctcggcgccggcatcgacgtg
gtctctgaaggcgaactgcgccgcgcgcttgctgccgacattccggcaaaccgcatcatg
ttctcaggtgtcggcaagacgccgtccgagatggatttcgcccttgaggccggcatctac
tgcttcaacgtcgaatccgagcctgagctcgaaatcctcaaccagcgcgctgtgagcgcg
ggcaaaaaagcgccggtctccttccgcatcaacccggatgtcgatgcaaagacgcattcc
aagatctcgaccggcaagaaggaaaacaaattcggcatctcatgggagcgcgcccgcgcc
atctatgcccatgccgcaaagttacccggcatcgaggtcaccggcatcgacatgcatatc
ggcagccagatcaccgaactgcggcccttcgacgacgccttcaagctgttgcatgacctt
gtcgcgacgctccgcgccgacggccacaccatccatcacgtcgatatcggcggaggcctc
ggcattccctacaaggacgacaacaatccgccgccgctgccagacgcctatgcggcaatc
gtcaagaaccagctgcgcggcctggactgcaagatcatcaccgaacccggccgcctgatc
gtcggcaatgccggcatcctggtgacagaagtcctctatgtgaaggatggcggcgaaaag
accttcgtcatcgtcgacggcgcgatgaacgatctcatccgtccgacgctctacgaggcc
tatcacgagattcgcccggtaacgatttcggcggccaacgcgccgcgcatccgcgccgat
gtcgtcggccccgtctgcgagaccggcgactatctggcgctcgaccgcgagatggcgatg
ccgaagcccggcgacctgatggccgtcagcactgccggcgcctatggcgcggtccaggcc
ggcacttataacagccgcctgctggtgcccgaagttctggtcaggggcagcgatttccat
acgattcgaccgcgcagaacctatgccgagctgatcagcctcgattccgttccggcctgg
ctcgactga
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