Rhizobium ruizarguesonis: J3P73_22730
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Entry
J3P73_22730 CDS
T07270
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
rrg
Rhizobium ruizarguesonis
Pathway
rrg00630
Glyoxylate and dicarboxylate metabolism
rrg00680
Methane metabolism
rrg01100
Metabolic pathways
rrg01120
Microbial metabolism in diverse environments
rrg01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rrg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
J3P73_22730 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
J3P73_22730 (fdhF)
Enzymes [BR:
rrg01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
J3P73_22730 (fdhF)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_21
Fer4_10
Fer4_6
Fer4_2
Fer4_9
Fer4_15
Fer4_16
Fer4_4
TPP_enzyme_M
Fer4_13
Motif
Other DBs
NCBI-ProteinID:
QSZ00599
LinkDB
All DBs
Position
complement(4649996..4652875)
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AA seq
959 aa
AA seq
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MSLIHEIDYGTPASKSEAMVRLTIDGQQISVPEGTSIMRASMEAGIKVPKLCATDMVDAF
GSCRLCLVEIEGRNGTPSSCTTPVAANMVVHTQTGRLKDIRRGVMELYISDHPLDCLTCA
ANGDCELQDMAGAVGLRDVRYGYEGDNHVKARSNGDINLKWMPKDESNPYFTYDPSKCIV
CSRCVRACEEVQGTFALTIEGRGFGSRVSPGMHEHFIDSECVSCGACVQACPTATLTEKS
VIQIGQPEHSAVTTCAYCGVGCSFKAEMRGEELVRMVPWKDGQANRGHSCVKGRFAYGYS
THKDRILNPMIREKVSDPWREVSWDEAFAHVALEFRRIQYQYGREAIGGITSSRCTNEET
YLVQKLIRAGFGNNNVDTCARVCHSPTGYGLGQTFGTSAGTQDFDSVEHSDVVVVIGANP
TDGHPVFGSRLKKRLRQGAKLIVIDPRRTDIVRSPHIEASYHLPLKPGTNVAVMTALAHV
IVTEGLFDEAFIRERCDWSEFEDWAGFVAEPQHSPEQTETFTGVPAADLRGAARLYAKGG
NGAIYYGLGVTEHSQGSTTVIAIANLAMATGNIGRPGVGVNPLRGQNNVQGSCDMGSFPH
ELPGYRHISDDATRDIFEKLWGVKLNNEPGLRIPNMLDAAVDGSFKGIYIQGEDILQSDP
DTKHVAAGLAAMECVVVQDLFLNETANYAHVFLPGSTFLEKDGTFTNAERRINRVRKVMS
PRNGYGDWEVTQKLAQAMGLDWNYTHPSEIMDEIAATTPSFAMVSYDYLEKMGSVQWPCN
EKNPLGSPIMHVNGFVRGKGKFIRTEYVATDERTGPRFPLLLTTGRILSQYNVGAQTRRT
ENVVWHAEDRLEIHPHDAEQRGVRDGDWVKLGSRSGDTTLRALITDRVATGVVYTTFHHP
NTQANVITTDFSDWATNCPEYKVTAVQVSPSNGPSEWQLEYDEQARQSRRIAGKLEAAE
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcatccatgaaatcgactacggcactcctgcttcgaaatccgaggccatggtg
aggctcaccatcgacggacagcagatcagcgtgccggagggcacctccatcatgcgcgcc
tcgatggaagccggcatcaaggtgccgaagctctgcgccaccgatatggtcgatgctttc
ggctcctgccggctctgcctcgtcgagatcgagggtcgcaacggcacgccctcttcgtgc
acgacgccggtggcggcaaacatggtggtgcacacgcagacggggcggctgaaggatatc
cgccgcggcgtgatggaactctatatttccgaccatccgctcgactgtctcacctgcgcg
gccaacggcgattgcgaattgcaggacatggcaggcgccgtcggcctgcgcgatgtgcgc
tacggctatgagggcgacaatcacgtcaaggcgcgcagcaatggcgacatcaatctgaaa
tggatgccgaaggacgaatccaatccctatttcacctatgatccctccaagtgcatcgtc
tgttcgcgctgcgtgcgcgcctgcgaggaggtgcagggcaccttcgcgctgacgatcgag
ggccgcggcttcggctcacgcgtttcgcccggcatgcacgagcatttcatcgattccgaa
tgcgtttcctgcggcgcctgcgtccaggcctgcccgacggcgacgctgacggagaaatcg
gtgatccagatcggccagccggagcattcggctgtcaccacctgcgcctattgcggcgtc
ggctgttctttcaaggcggagatgcgcggcgaggaactggtgcgcatggtgccgtggaag
gacggtcaggccaatcgcggccattcctgcgtcaagggccgcttcgcctatggctactcc
acccacaaggaccgcatcctcaatccgatgatccgcgaaaaggtcagcgatccctggcgg
gaagtgagctgggacgaggccttcgcgcatgtggcgctggagttccgccgcatccagtat
caatacggccgcgaggcgattggcggcatcacctcgtcgcgttgcaccaatgaggaaacg
tatctggtgcagaagctgatccgcgccggcttcggtaacaacaatgtcgatacctgcgcc
cgcgtctgccattcgccgaccggctacggtctcggccagacgttcggcacgtcggcgggt
acgcaggatttcgacagcgtcgagcattcggatgtcgtcgtcgttatcggcgccaatccg
accgacgggcatccggtgttcggctcgcggctgaagaagcggctgcgccagggcgccaag
ctcattgtcatcgatccgcgacgtaccgatatcgtccgctcgccgcatatcgaggcctcg
tatcatctgccgctgaagcccggcaccaatgtcgcggtcatgacggcgctggcgcatgtg
atcgtcaccgaaggcctctttgacgaggcgttcatccgcgagcgctgcgactggtcggag
ttcgaggactgggcgggcttcgtcgccgaaccgcagcatagtcccgagcagaccgagacc
ttcaccggcgtgccggccgcggatctgcgcggcgcggcacggctctatgccaaaggcggc
aacggtgcgatctactacggcctcggcgtcaccgaacacagccagggctcgaccacggtc
atcgcgatcgccaacctggcgatggcgaccggcaatatcggccgtcccggcgtcggcgtg
aacccgctgcgcggccagaacaatgtgcagggttcctgcgacatgggttccttcccgcac
gaactgccgggctaccggcacatttccgacgatgcgacgcgcgatatcttcgaaaagctc
tggggcgtgaagctcaacaacgagccgggcttgcgtattccgaacatgctggatgcggca
gtcgacggctccttcaaaggcatctacatccagggcgaagacatcctgcagtccgatccc
gataccaaacatgtcgcggccgggcttgcggcgatggaatgcgtcgtcgtgcaggacctg
ttcctcaacgagaccgccaattacgctcatgtcttcctgccgggctcaaccttcctcgag
aaggacggcaccttcaccaatgccgaacgacgcatcaatcgcgtgcgcaaggtgatgtcg
ccgcgcaacggctatggcgactgggaagtgacgcagaagcttgcccaggcgatggggctc
gactggaattacacccatccgtcggaaatcatggacgagatcgccgcgacgacgccgagt
tttgcgatggtctcctacgactatctcgaaaaaatgggctcggtgcagtggccctgcaac
gagaagaacccgctcggctcgccgatcatgcatgtcaatggcttcgtgcgcggcaagggc
aagttcatccgcaccgaatatgtggcgaccgacgagcgcaccggtccgcgcttcccgctg
ctgctgacaaccggccgcatcctcagccagtacaatgtcggggcgcagacgcggcggacc
gagaatgtcgtctggcatgcggaagaccggctggaaatccatccgcacgatgccgagcag
cgcggcgttcgcgacggcgactgggtgaagctcggcagccgctccggcgacacgaccctt
agggcactgatcaccgatcgcgtcgcgacgggtgtcgtctacacgaccttccatcatccc
aatacgcaggcgaacgtcatcaccaccgatttctccgactgggcgacgaactgcccggaa
tacaaggtgacggcggtgcaggtctcgccctccaacgggccgagtgaatggcagctggaa
tatgacgagcaggcgcgtcagtcacgccgcatcgccggcaaactcgaggcggcggagtga
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