Rhizobium ruizarguesonis: J3P73_23560
Help
Entry
J3P73_23560 CDS
T07270
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rrg
Rhizobium ruizarguesonis
Pathway
rrg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rrg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J3P73_23560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrg03400
]
J3P73_23560
Enzymes [BR:
rrg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
J3P73_23560
DNA repair and recombination proteins [BR:
rrg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
J3P73_23560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QSZ03463
LinkDB
All DBs
Position
complement(4819503..4820306)
Genome browser
AA seq
267 aa
AA seq
DB search
MGFSITTWNINSVRLRMPIVEQLVLKHRPDILCLQETKVTNDLFPAAPLRAMGYNHIIIH
GQKGYHGVAIASRIPLTEDHRQDYCGVGDARHISAIFEHGNRRVRLHNFYVPAGGDEPDR
TINPKFGHKLDFIEEMKLLKANGEANTSAILVGDLNIAPLEHDVWSHKQLLKIVSHTPVE
TEGLLEVMKRGAWLDLMRQHVPENEKLYTWWSYRAKDWEAADRGRRLDHIWSSSDLGPHL
KRIEILKEARGWDRPSDHVPVTAHFDF
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgggcttttcgatcaccacctggaacatcaactcggtgcggctgcgcatgccgatcgtc
gagcagctcgttctcaagcacaggcccgatatcctctgcctgcaggaaaccaaggtgacg
aacgacctgtttccggcggcaccgctcagggcgatgggctacaatcacattatcatccat
ggccagaaaggctatcatggcgtggcgatcgcctcgcgcattccgctaaccgaggatcac
cggcaggattattgcggcgtcggcgatgcgcgccacatctcggcgatcttcgagcacggc
aatcgtcgagtccggctgcataatttctacgtcccggccggcggtgacgagccggatcgc
acgatcaatccgaaattcggccacaagctcgatttcatcgaggagatgaagctgctgaaa
gccaatggcgaggccaacacctcagccatcctcgtcggtgacctcaacatcgcgccgctg
gagcatgacgtctggtcgcacaagcagcttctgaagatcgtcagccatacgcccgtcgaa
accgaagggctgctcgaggtgatgaagcgcggcgcctggctcgatctcatgcgccagcat
gtgcctgaaaacgagaagctctacacctggtggagctaccgcgccaaggactgggaggcg
gccgatcgcggccgccgtctcgaccatatctggtcatcgtcggatctcgggccgcatctg
aagcggatcgaaatcctgaaggaggcgcgcggctgggatcgcccctccgaccacgtgccg
gtgacggcgcatttcgatttctag
DBGET
integrated database retrieval system
