Rhizobium ruizarguesonis: J3P73_27090
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Entry
J3P73_27090 CDS
T07270
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
rrg
Rhizobium ruizarguesonis
Brite
KEGG Orthology (KO) [BR:
rrg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rrg03000
]
J3P73_27090
Transcription factors [BR:
rrg03000
]
Prokaryotic type
Helix-turn-helix
LacI family
J3P73_27090
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
LacI
Peripla_BP_1
Peripla_BP_4
HTH_31
HTH_IclR
HTH_3
HTH_Tnp_ISL3
Sigma54_DBD
Sigma70_r4
HTH_6
Xre-like-HTH
HTH_10
TetR_N
Motif
Other DBs
NCBI-ProteinID:
QSZ04142
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All DBs
Position
p1:555241..556239
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AA seq
332 aa
AA seq
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MEFKHQATVTLAEVAEAAGVGESTVSRVLRNHGSFSGKTRERVMAAVERLGYVPNRIAGT
LASTGSRLVAFVIPSLSNIVFPDVLRGASAVLEENRYQAVFSVTDYDPGKEEALAAAMLA
WRPAAVMLAGCEHTEGTVKMLRASGCRVVELLDLDGDALDIAVGFSNRAAGRGSAAFLLK
RGYRRIGYVGHDLNRDTRAGKRFSSFCETLGAHDAPLVAREILPGASSVENGRLGLERLL
ARTTDLDAVYFSNDDMALGGYFHCLAQGIAIPSKLAIFGYNGLDIGRATPQPLSTIRTPR
VATGEIAAQLVVANAPPQSVDLGFELIEGATA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggaattcaaacatcaggcgacggtgacgcttgccgaagtcgcggaggcggccggtgtc
ggtgagagcacggtgtcgcgcgtgctgcgcaaccacggttcgttttctggcaagacgcgc
gagcgggtgatggccgccgtcgagcggctgggctatgtgccgaaccggatcgcgggaacg
ctggcctccaccggttcgcgtcttgtcgccttcgttattccctctttgtcgaacatcgtc
tttcccgatgtgctgcgcggtgccagtgctgttctggaggaaaaccggtatcaggcggtc
ttctccgtgaccgattatgatccgggcaaggaggaagcgctcgccgccgcgatgcttgcc
tggcggccggcggcggtcatgctggcgggatgcgagcataccgagggtacagtgaagatg
ctgcgcgccagcggctgtcgggtcgtcgaactgcttgatctcgacggcgatgctctcgat
atcgcggtcggcttctcgaaccgcgcagccgggcgggggagcgctgccttcctgctcaag
cggggttatcgccggatcggctatgtcggtcacgacctgaaccgtgatacccgtgccggc
aagcggttttccagcttttgcgaaacgctcggcgcacatgacgccccgctcgtcgcccgc
gaaattctcccaggcgcttcgtccgtggaaaacggcaggttggggctggagcggctgctt
gcccggacgaccgatctcgatgcggtttatttctccaacgacgacatggcgctgggcggc
tattttcattgtctggctcaagggatcgcgatcccctcgaagctcgccattttcggctat
aacggcctcgatatcggccgggcaaccccacagccgttgtcgaccatccgaacgccgcgc
gtggcgaccggggagatagccgcgcaactggtcgtcgctaatgcgccgccgcagtccgtc
gatctcggctttgagctgatcgaaggggcaaccgcgtaa
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