Rickettsia rickettsii Hauke: RPM_01350
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Entry
RPM_01350 CDS
T01723
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
rrh
Rickettsia rickettsii Hauke
Pathway
rrh03030
DNA replication
rrh03430
Mismatch repair
rrh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rrh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RPM_01350 (holA)
03430 Mismatch repair
RPM_01350 (holA)
03440 Homologous recombination
RPM_01350 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rrh03032
]
RPM_01350 (holA)
03400 DNA repair and recombination proteins [BR:
rrh03400
]
RPM_01350 (holA)
Enzymes [BR:
rrh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RPM_01350 (holA)
DNA replication proteins [BR:
rrh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RPM_01350 (holA)
DNA repair and recombination proteins [BR:
rrh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RPM_01350 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPOC_AIPP2
Motif
Other DBs
NCBI-ProteinID:
AFB29877
LinkDB
All DBs
Position
252059..253033
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AA seq
324 aa
AA seq
DB search
MKFYFSQIGRLFELITSGKIRALLLYGPDKGYIEKICKHLVKSLNMLQTSIEYADLNISS
LEILLNSSNFFGQKELIKIRSVGNSIDQNLKTILNSDYINFPVFIGEELTSSGSIRKFFE
TEEYLAAVACYHDDEAKIERIILGKVEKNNKVISKEAITYLKAHLKGDHDLICSEINKLI
YFVHDAREITLNDVLEVISSEITANGSDLAMYFSKKDYSNFLQELDILKKQNINEVLIIR
ALIRHYLNLYIVLSKVKNGERLELAIKSLSPPIFYQYINDFTKIANGLSLTECLKTLKVL
QQAEVDYKLNPASFDLFQSILQSK
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaaattttatttttcacaaataggtaggttatttgaactaataacatccggaaaaatt
agagctcttttactatatggtcctgataaaggttatatagaaaaaatttgtaagcattta
gtaaaaagcttaaatatgctacaaacttctatagaatacgcagatcttaatatttcatct
ttagaaatattacttaattcgtctaatttttttggtcaaaaagaattaattaaaattaga
tcggttgggaattcaatagatcagaatttaaaaacaattctaaacagtgattatataaat
tttcctgtatttataggtgaagaactgacttctagtgggagcattagaaagttttttgaa
acggaagaatatttagcagcagttgcttgttatcatgatgatgaagcaaaaattgaacga
attattttaggtaaagtagaaaaaaataataaagttataagtaaagaagctattacttat
ttaaaagctcatttaaaaggtgatcatgatttaatttgtagcgaaataaataaattaata
tattttgttcacgacgcacgcgaaattactttaaacgacgtgctagaagttataagtagc
gaaattacggcaaacggcagtgatttagcaatgtatttttcaaaaaaagattatagtaat
tttctgcaagagcttgatatattaaaaaaacaaaatatcaatgaagttttaattattaga
gcattaataaggcattatttaaatttatatatagttttgtcgaaagtaaaaaacggtgag
cgtttggaactcgcaataaaatcattatcaccaccgattttctatcagtatattaatgat
tttacgaagatagcaaacggtcttagcctcactgaatgtctaaagactttaaaagtgcta
caacaggcagaagtggattataagttaaatcctgctagtttcgatttattccaaagtata
ctccaaagtaaatga
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