Rickettsia rickettsii Hauke: RPM_03285
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Entry
RPM_03285 CDS
T01723
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rrh
Rickettsia rickettsii Hauke
Brite
KEGG Orthology (KO) [BR:
rrh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rrh03016
]
RPM_03285
Enzymes [BR:
rrh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
RPM_03285
Transfer RNA biogenesis [BR:
rrh03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RPM_03285
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AFB30231
LinkDB
All DBs
Position
complement(580781..581392)
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AA seq
203 aa
AA seq
DB search
MTIKIYQNDLPNNFTLEGDLAIDTETMGLNLHRDKLCLLQFSNGNGEAHLVHFTNQDYTA
PNVKALLLDKTRCKIFHFARFDLASIKKYLSIDLENIFCTKISSKLVRTYTDSHGLKDLC
RELLNINISKQQQSSYWGADNLSSEQKEYAAKDVLYLHQLKDILQKMLLKENRYELAQDI
FRFLPIRANLDLIGWNEIDIFMH
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgactataaaaatttatcaaaacgacctacctaataattttacacttgaaggagatcta
gctatagataccgaaacaatgggactaaatctccatagagataaactatgtttgctacaa
tttagtaacggcaatggtgaagctcatcttgtgcattttacaaatcaagattatacagct
cctaatgtaaaagcattattactagataaaactagatgtaagatatttcattttgctaga
tttgatctagcatccataaaaaaatatttaagtatagatttagaaaatatcttttgtact
aaaatatcttcaaaactagttagaacttataccgatagtcatgggcttaaggatttgtgc
cgagaattgcttaatataaatatttcaaaacaacaacaatcttcctattggggtgcggat
aatttatcttcagaacaaaaagaatatgcagcaaaagatgtgctttatttgcatcagtta
aaagatattttacaaaaaatgctacttaaagaaaataggtatgaacttgcccaagatatt
ttccgttttttaccgataagagctaatttagaccttatcggttggaatgaaattgatatt
ttcatgcattaa
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