Rickettsia rickettsii Hauke: RPM_03730
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Entry
RPM_03730 CDS
T01723
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rrh
Rickettsia rickettsii Hauke
Pathway
rrh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rrh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RPM_03730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rrh03019
]
RPM_03730
03016 Transfer RNA biogenesis [BR:
rrh03016
]
RPM_03730
Enzymes [BR:
rrh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
RPM_03730
Messenger RNA biogenesis [BR:
rrh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RPM_03730
Transfer RNA biogenesis [BR:
rrh03016
]
Prokaryotic type
tRNA degradation factors
RPM_03730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
Transposon_TraM
CSD
Motif
Other DBs
NCBI-ProteinID:
AFB30303
LinkDB
All DBs
Position
complement(648013..650259)
Genome browser
AA seq
748 aa
AA seq
DB search
MFNEITKSVTWNGQVLELSTGKIARQADGAVTVKMGNSVLLCTAVVANKAKEGIGFLPLT
INYREMAYAAGKIPGGFFKHEGKPSDREVLVSRLIDRPIRPLFHPAFVNETHVTCSVLSY
DPETPVDILAIIGASAALSLSPAPYLEIVAASKVGLINGEFVLNPTLALLKTSQLDLVVA
GTSDSVMMVESEAHLLSEEQMLEAVKFGFESFQPVIKIIKELAEEAKKPKLEMQALYPAS
LKKEIEKLFVKEIEQAFAMKSKQERSTNLDLITEKVFTHFVSDIENKKYSHYQIESALKA
IESGILRNEILEKNRRIDGRSTTDIRQIACEIGLLPSAHGSALFTRGETQSLVSTTFGTS
LDEQIVDSLEGEYKERFMLNYIFPPYSVNEAMPMKAPSRREVGHGKLAWRAINPILPNKV
QFPYSIRVVAETTESNGSSSMATVCGSSLALMYAGVPIKAPVAGIAMGLVKEGKNFAVLS
DILGDEDYFGDMDFKVAGTGEGITALQMDIKISGVDFKIMKVALEQARLGRLHILEQMNK
VISKPNNELSKNAPSTTTIKIDKDKIRDIIGPGGKVIKEICETSGAKIDISDDGTVSVYA
SDRDKLKVALDKIKAIVVEPEIGEIFNGTVVKVLDSGAFINYVGNKDGFVHISEVSGERI
ETVSSVLKQGDIVKVKLIGFDNKGKAKLTIKNADKDKFSNNTKPKTSVNNTKDNSEPEQR
HDSSKKRAWNEDNNAEIAEVITERKYFN
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacgaaataactaagagtgttacatggaacgggcaagttcttgagcttagtaca
ggtaaaatagcaaggcaagctgacggggcagttacggtaaaaatgggtaattccgtttta
ttatgtacggcagtagtagctaacaaagcaaaagagggcataggttttcttcctttaaca
attaattatagagaaatggcatatgctgccggtaagataccagggggattttttaaacat
gagggaaaaccatcagatagagaagttttagtatctcgtttaatagatagaccgattaga
ccattatttcatccggcttttgtgaatgaaacgcatgtcacttgcagtgttctttcatat
gatcctgaaactccggtagatatacttgcaattatcggtgcatcggctgcacttagccta
tcccctgctccttatctagaaatagttgcggcaagtaaagtaggtttaatcaatggtgaa
tttgttttaaatccgacacttgcattattaaaaacaagtcagcttgatttagtagttgca
ggaacatcagattcagtaatgatggttgaatcagaagctcatttactttctgaagaacaa
atgttagaagctgtaaaatttggatttgaaagctttcagccggtaataaagataattaaa
gaactagcagaagaagctaaaaaaccaaaacttgaaatgcaagctttatatcctgcttca
ttaaagaaagaaattgagaagttatttgtaaaagaaattgaacaagcttttgcaatgaaa
tctaaacaagaacgtagcactaatttagatttaataactgaaaaagtttttacacatttt
gtaagcgacatagaaaataaaaaatatagtcattatcaaatcgaatcagctttaaaagct
attgaatcaggtatattacgtaacgagattttagaaaaaaatagacgtatcgatggaaga
agtaccacggatataagacaaattgcttgtgaaataggtttactaccttccgcacatggt
tcagctttatttactagaggtgaaacgcaaagcttagttagtactacattcggtactagt
ttagatgagcagatagttgacagtttagagggtgagtataaagagcgttttatgctcaat
tatatctttccgccctactctgtaaatgaagcaatgccaatgaaagcacctagtcgtcgt
gaagtcggacacggtaaactcgcatggcgtgctattaatccaatattacctaataaagta
caatttccttattctattagagtagttgccgaaactacggaatctaacggttcttcttca
atggcaactgtttgcggtagttctcttgctttaatgtatgccggcgtaccgataaaagca
ccggttgcgggtattgctatgggacttgttaaggaaggtaaaaattttgccgtattatcg
gatattctcggcgatgaagattatttcggtgatatggactttaaggttgcaggaactggc
gaagggattactgcattacaaatggatatcaaaatatccggagtagattttaaaataatg
aaagtagctttagagcaagcacgactcggtcgtttacatatactggagcaaatgaataaa
gttatcagtaaaccaaataacgaactaagtaaaaatgctccttctactactactataaaa
atagataaggataaaattagagatattataggaccgggaggtaaagtaataaaggaaatt
tgtgaaactagcggtgctaaaatagatataagcgatgacggtacggtgtctgtttatgct
tcagatagagataagctaaaagttgccttagataaaattaaagctattgtcgttgaacct
gaaatcggtgaaatatttaacggtacggtagtgaaagtcttagattccggtgcttttatt
aattatgtaggtaataaagacggctttgttcatattagtgaagtatcaggagaaagaata
gaaacggttagcagtgttttaaaacaaggcgatatagtaaaagttaagctaataggcttt
gataataaaggcaaagcaaaattaactattaaaaatgccgataaagataaattttcaaat
aatacaaagccaaaaactagtgttaataatactaaggacaattcagaacctgagcagcga
catgattctagtaaaaaacgcgcttggaatgaagataataatgctgaaattgctgaagta
attacagaacgtaagtattttaattga
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