Rickettsia rickettsii Hauke: RPM_05470
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Entry
RPM_05470 CDS
T01723
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rrh
Rickettsia rickettsii Hauke
Pathway
rrh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rrh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RPM_05470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rrh03021
]
RPM_05470
03400 DNA repair and recombination proteins [BR:
rrh03400
]
RPM_05470
Enzymes [BR:
rrh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RPM_05470
Transcription machinery [BR:
rrh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RPM_05470
DNA repair and recombination proteins [BR:
rrh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RPM_05470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
IDH
Par3_HAL_N_term
Motif
Other DBs
NCBI-ProteinID:
AFB30608
LinkDB
All DBs
Position
complement(929777..930799)
Genome browser
AA seq
340 aa
AA seq
DB search
MLSLSKNWNTLIKPNKVAYENFPETNNKAKIVVEPLERGFGLTLGNAMRRVLLSSLQGAA
ITSIKIPAIEHEFSSIPGVKEDVSEVILNIKGIEVKMHVAEKRIMKLKATGPCVVTAGMI
ETGHDVEILNPDHVICDLAKDKQLEMELTCKVGKGYVLSTNNYEDNLPIGEIAIDALFNP
VKSVTYKVENTRVGQVTDYDKLIMFVETNGAVLPEMAVGLAARILQEQLQLFISFEEQEE
DKQVKTDALPFSPYLLKRVDELELSVRSANCLKNDNIIYIGDLVKRTEADMLRTPNFGRK
SLNEIKEILAKFNLRFGMDVPDWPPENMQELSKRYEDSYN
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgttatcgttaagtaaaaattggaatactttaataaagccgaataaagttgcttatgaa
aattttccagaaaccaataataaagctaaaattgtagttgaacctttagaaagaggtttt
ggtttaacactcggtaatgctatgagaagagtattactttcttctttacaaggagcagct
atcacgtctataaagatccctgctatagaacatgaattttcttctatacccggtgtaaaa
gaagatgtatcagaagtgattttaaacattaaaggtattgaagtaaaaatgcatgttgca
gaaaaacgtatcatgaaattaaaagcaacaggaccttgtgttgtaacggccggtatgatt
gagacaggtcatgatgtagaaatactgaatccggatcatgtaatttgtgatctagctaag
gacaagcagcttgaaatggaattaacttgcaaggttggtaaaggatatgtacttagcaca
aataattatgaggataatttacctattggtgaaatagctatagatgctttatttaatccg
gtaaaaagtgttacttataaggtagaaaatactagggtaggtcaggttaccgattatgat
aaattaattatgtttgtagaaactaacggtgctgtattacctgaaatggctgtaggttta
gctgcacgtattttacaggagcaattacaattatttatttcttttgaagaacaggaagaa
gataagcaagttaaaactgatgctttaccattttcaccttatttacttaagagagttgat
gaattggaattatcggttagatcggcaaattgtttgaaaaatgataatataatatatata
ggggatctagtaaaaagaacggaagccgatatgctaagaactccaaattttggtagaaaa
tctttaaatgagattaaagaaatattggcaaaatttaatttaagattcggtatggatgta
ccggattggccaccggaaaatatgcaggaattatctaaacgttatgaagattcttataat
taa
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