Rhizobium rhododendri: PR018_00330
Help
Entry
PR018_00330 CDS
T08971
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rrho
Rhizobium rhododendri
Pathway
rrho00300
Lysine biosynthesis
rrho01100
Metabolic pathways
rrho01120
Microbial metabolism in diverse environments
rrho01230
Biosynthesis of amino acids
Module
rrho_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rrho00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PR018_00330 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rrho01002
]
PR018_00330 (dapE)
Enzymes [BR:
rrho01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
PR018_00330 (dapE)
Peptidases and inhibitors [BR:
rrho01002
]
Metallo peptidases
Family M20
PR018_00330 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
WFS23015
LinkDB
All DBs
Position
complement(60643..61836)
Genome browser
AA seq
397 aa
AA seq
DB search
MNTTDPVANLQTLIRCPSVTPADAGALSALTDMLLPLGFVVERMTASEPGIPDIDNLYAR
LGHEGPHLMFAGHTDVVPVGDEASWSHPPFAAEIADGQIFGRGAVDMKGGIACFAAAVAR
YIARHGAPKGSISFLITGDEEGPAINGTTKLLKWAAEKGETWDACLVGEPTNPDRLGDMI
KIGRRGSLSGRITVNGVQGHAAYPDLADNPVRSILALTQALMHPPFDAGTDNFQPSNLEV
TTLDVGNGATNVIPAKATASFNIRFNDTWTADTLKAEIVARLDRAAADQTLRPGRPPASY
EIAWAERPSHVFLTRNNELIASLSSAVETVTGQAPRLSTTGGTSDARFIKDYCPVVEFGL
VGQTMHMVDERVAVADLETLTAIYETFLERWFQNADV
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccaccgatcccgtcgccaatctccagaccctgatccgctgcccgtcggtaaca
cccgccgacgccggtgctctttcggcactgaccgacatgctgttgccgctcggcttcgtc
gtcgaacggatgactgccagcgaacctggcattcccgacatcgacaatctctatgcccgg
ctcggccatgaggggccgcatttgatgtttgccggccatacagacgtcgtgcctgttggc
gacgaagcaagctggagccatccgccctttgccgccgaaatcgccgatggccagatattc
ggacgcggcgcggtcgatatgaaaggcggtatcgcctgctttgctgctgctgttgcccgc
tatatcgcccggcacggcgcgccaaagggctcgatctcgtttctgattaccggcgacgag
gaagggccggcgatcaacggcaccaccaagctactcaaatgggctgccgaaaagggcgag
acatgggacgcctgcctggtgggcgaaccgaccaatcccgacaggctcggcgacatgatc
aagataggtcggcgcggttcactgtcgggcagaatcaccgtcaacggcgtccagggccac
gcggcctatcctgacctcgccgacaatccggtgcgcagtattctcgccctgacgcaggcg
ctgatgcatccgccattcgacgcgggcactgacaatttccagccatccaacctcgaagtg
acgacgctcgacgtcggcaacggcgctaccaacgtcatcccggcgaaggcgacggcaagc
ttcaatatccgtttcaacgacacatggacggcagatacgctgaaggccgagatcgtcgca
cggctcgaccgggcggcagccgaccagacgctgcgtccgggtcgtccgccggcatcctac
gagatcgcctgggcggagcggccgagccatgtgttcctcacccgcaacaacgagttgatc
gcctcgctttcgtcagctgtggagacggtgaccgggcaggcgcccagactgtccacgacc
ggcggcacgtcggatgcgcgtttcatcaaggactattgtccggtcgtagaattcggcctc
gtcggccagaccatgcacatggtcgacgagcgcgttgcggtcgccgatctcgaaacgctg
acggcaatctacgagacattcctcgaacgctggttccagaatgccgacgtatag
DBGET
integrated database retrieval system
