KEGG   Rhizobium rhododendri: PR018_00760
Entry
PR018_00760       CDS       T08971                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
rrho  Rhizobium rhododendri
Brite
KEGG Orthology (KO) [BR:rrho00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rrho03400]
    PR018_00760
Enzymes [BR:rrho01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PR018_00760
    5.6.2.6  RNA 3'-5' helicase
     PR018_00760
DNA repair and recombination proteins [BR:rrho03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    PR018_00760
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 PSD4
Other DBs
NCBI-ProteinID: WFS23090
UniProt: A0ABY8IJ81
LinkDB
Position
141800..144310
AA seq 836 aa
MDRIETETLLALPIPFTRWFAEKGWQPRAHQLELLARAEAGESTLLIAPTGAGKTLAGFL
PSLTDLTRRGKIPPGSAFSGIHTLYISPLKALAVDIERNLMKPVEEMGLPVTVENRTGDT
PSAKRQRQKLSPPDILLTTPEQVALLLANGQAQRFFGDLRYIVLDELHSLVSSKRGHMLS
LGLARLRRLAPGLQTIGLSATVSDPMELQKWLVGQREGEDRHAGLVTVAGGAKPDISILA
SEERIPWAGHSAKYAIPDVYSQLLDHKTTLLFVNTRSQAEMLFQELWTVNDDNLPIALHH
GSLDVGQRRKVEAAMAANKLRAVVATSTLDLGIDWGDVDLVIHVGAPKGASRLAQRIGRS
NHRMDEPSKAILVPANRFEVMECQAALDANYIGAQDTPPVGRGTLDVLAQHVLGMACAEP
FDPLELFDEITSASPYAYLSWETFEQIVDFVATGGYALRAYERYARIRKMEDGRWRISNP
AVAQQYRLNSGTIVESPMLNLKMVKRGAGGRIGRGGATLGKMEEYFFEQLSPGDTFIFSG
KVLRYEGIRENEALASQAYSNDPKIPSYNGGKFPLSTYLADQVRSMLADPDRWHELPDQV
RDWLALQREKSMVPKRDELLIETFPRGSRAYMVAYPFEGRLAHQTLGMLLTRRLERAGAK
PLGFVATDYSLGIWGLEDMGQMIATGRLSLSTLFDEDMLGDDLEEWLDESFLLKRTFRNC
AVISGLIERRHPGKEKSGRQVTVSADLIYDVLRSHEPDHILLQATRQDAATGLLDIARLG
DMLRRIKGHITHRALDHISPLAVPVMLEIGRESVPGEAHDALLAEAADDLIAEALS
NT seq 2511 nt   +upstreamnt  +downstreamnt
gtggatcgcatcgagactgagacgctactggccctgcccattcccttcacccgctggttt
gcggaaaagggctggcagccccgcgcccatcagctcgaactgctggcccgcgcggaagct
ggcgaaagcacgctgctgattgcgccgacaggtgccggcaagacgctggccggctttctg
ccctcgcttacggacctgacgcggcgcgggaagataccgccagggtcggccttctccggc
atccacacgctttacatttcaccgctcaaggcgctggccgtcgatatcgagcgaaacctg
atgaagcccgtcgaggagatgggcctgccggtcaccgtcgagaaccgcacgggcgatacg
ccgagcgccaaacgccagcgccagaagctctcgccgccggacatcctgctgaccacaccg
gagcaggtggcgctgctgctcgctaatggccaggcccagcgcttcttcggcgatctgaga
tatatcgtcctcgacgagttgcactcgctggtctcctcgaagcgcggccacatgctgtcg
ctggggctggcgcggctgcggcggctggcgcccggtctgcagaccattggcctgtccgct
accgtctccgaccccatggaactgcagaaatggctggtcggccagcgcgagggcgaggat
cgtcacgcaggcctcgtgactgtcgccggcggcgccaagcctgatatctcgatccttgcc
agcgaagaacgcatcccctgggccggccattcggcgaaatacgccatccccgacgtctac
agccagttgctcgaccacaagacgacgttgctcttcgtcaacacccgcagccaggctgaa
atgctgttccaggaactctggacggtcaatgacgacaatctgccgatcgctctgcatcat
ggttcgctcgatgtcggccagcgccgcaaggtcgaggcggcgatggcggccaacaagctg
cgcgccgtcgtcgccacatctacgctcgacctcgggatcgactggggcgatgtcgatctc
gtcatccatgtcggtgcacccaagggtgcctcgcggctggcccagcgcatcggccgctcc
aaccaccgcatggacgagccgtcgaaggcgattctcgtaccggccaatcgcttcgaggtg
atggagtgccaggctgctctcgatgccaattacatcggcgcacaggacaccccgccggtc
ggccggggcacgctcgacgtgttggcccagcacgtgctcggcatggcctgcgccgagccc
ttcgatccgctcgaactgttcgacgagatcaccagcgcctctccctatgcctatctatcg
tgggagaccttcgagcagatcgtcgatttcgtcgccaccggcggctacgcgctgcgcgcc
tatgagcgctacgcccgcatccgcaagatggaggacggccgctggcgcatctccaatccg
gccgtggcgcagcaataccgcctgaactcgggcaccatcgtcgaatcgccgatgctgaac
ctgaagatggtcaaacgcggcgccggcggacgcatcggccgcggcggggcaacgctcggc
aagatggaggagtacttcttcgagcagctttcgccgggcgacactttcatcttctcgggc
aaggtgctgcgctatgagggtatccgcgaaaacgaggcgctggccagccaggcctattcc
aacgacccgaagatcccttcctacaatggcggcaagttcccgctgtcgacctatctcgct
gaccaggtccgctcgatgctggccgatcccgaccgctggcacgagctaccggaccaggtg
cgcgactggctagcgttgcagcgggaaaagtcgatggtgccgaaacgcgacgaactgctg
atcgaaacatttccgcgcggcagccgcgcctacatggtggcctatcccttcgaaggacgg
cttgcccaccagacgcttggcatgctgctgacccggcggctggagcgtgccggcgccaag
ccgctcggcttcgtcgccacagattattcgctcggcatctgggggctggaggacatgggc
cagatgatcgccaccggccgcctcagcctgtccacgctgttcgacgaggacatgctcggc
gacgatctcgaggagtggctggacgagtccttcctcctgaagcgcaccttccgcaattgc
gctgtcatctccggcctgatcgaacgtcgccatcccggcaaggaaaagtctggccgccag
gtgactgtatcggccgatctgatctatgacgtgttgcgcagccacgaacccgatcacatc
cttcttcaggcgacgcggcaggatgcggcaacggggcttttggatattgcccggcttggc
gatatgctgaggcgaatcaagggccacatcacccaccgggcgctcgaccacatctcgccg
ctggccgtaccggtcatgctcgaaataggccgggaatccgttccaggagaggcccatgac
gcgctgctggccgaagccgccgacgatctgatcgccgaggcgctgagctga

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