Rhizobium rhododendri: PR018_04415
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Entry
PR018_04415 CDS
T08971
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rrho
Rhizobium rhododendri
Pathway
rrho00260
Glycine, serine and threonine metabolism
rrho00460
Cyanoamino acid metabolism
rrho00630
Glyoxylate and dicarboxylate metabolism
rrho00670
One carbon pool by folate
rrho00680
Methane metabolism
rrho01100
Metabolic pathways
rrho01110
Biosynthesis of secondary metabolites
rrho01120
Microbial metabolism in diverse environments
rrho01200
Carbon metabolism
rrho01230
Biosynthesis of amino acids
rrho01240
Biosynthesis of cofactors
rrho04981
Folate transport and metabolism
Module
rrho_M00140
C1-unit interconversion, prokaryotes
rrho_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
rrho00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PR018_04415
09102 Energy metabolism
00680 Methane metabolism
PR018_04415
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PR018_04415
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PR018_04415
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PR018_04415
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PR018_04415
Enzymes [BR:
rrho01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PR018_04415
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
WFS23764
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Position
890620..891918
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AA seq
432 aa
AA seq
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MTHPSTEPFFNRPLSEADPEIFGAITKELGRQRHEIELIASENIVSRAVLEAQGSIMTNK
YAEGYPGKRYYGGCQFVDIAEELAISRAKQLFGVEFANVQPNSGSQMNQAVFLALLQPGD
TFMGLDLNSGGHLTHGSPVNMSGKWFNVVSYGVREGDNLLDMEEVARKAEETKPKLIIAG
GTAYSRTWNWKRFREIADSVGAYLMVDMAHIAGLVAGGQHPSPFPHCHVATTTTHKSLRG
PRGGMILTNDEGLAKKFNSAVFPGLQGGPLMHVIAAKAVAFGEALKPEFKEYAAQVVKNA
KTLAETLMAGGVDVVSGGTDNHLLLVDLRKKNATGKRAEAALGRAYITCNKNGIPFDPEK
PFVTSGVRLGTPAGTTRGFKEAEFKEIGNVIIEVLDGLKVANSDEGNAVVEAAVREKVLA
LTNRFPMYDYIG
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgacccatccttccaccgagcccttcttcaatcgcccgctgtccgaggccgatcctgaa
atcttcggcgcgatcaccaaggaactgggtcgtcagcgacacgagatcgaactgatcgcc
tccgaaaacatcgtctcgcgcgccgtgctggaagcgcagggctcgatcatgaccaacaaa
tatgccgagggatatccgggcaagcgctactacggcggctgccagttcgtcgacatcgcc
gaggagctggccatctcgcgcgccaagcagctgttcggcgtcgagttcgccaacgtccag
ccaaactccggcagccaaatgaaccaggctgtctttctggcgctgctgcagccgggcgac
acattcatgggccttgacctcaattccggtggtcacctgacgcacggctcgccggtcaac
atgtcaggcaagtggttcaacgtcgtttcctacggcgtgcgcgaaggcgacaacctgctc
gacatggaagaagttgcccgcaaggccgaggaaaccaagccgaagctgatcatcgccggt
ggcacggcctattcccgcacctggaactggaagcgtttccgtgagatcgcagactctgtc
ggtgcctacctgatggtcgacatggctcacatcgccggcctcgttgccggtggccagcat
ccgtcgccgttccctcattgccacgtggcgacgaccacgacccacaagtcgctccgcggc
ccgcgtggtggcatgatccttaccaatgatgagggtctggcaaaaaagttcaactcggcc
gtcttcccgggcctgcagggcggaccgctgatgcacgtcatcgccgccaaggccgtcgca
ttcggcgaagcgctgaagcctgaattcaaggaatacgccgcccaggtggtcaagaacgcc
aagaccctggccgaaacgctgatggccggcggtgtcgacgtcgtctccggcggcaccgac
aaccacctgctgctggtcgacctgcgcaagaagaacgccacaggcaagcgcgccgaggca
gcccttggccgcgcctacatcacctgcaacaagaacggcatccccttcgatccggaaaag
cccttcgtcacctcgggcgtccgcctcggcacgccagccggcacgacgcgcggtttcaag
gaggccgaatttaaggaaatcggcaatgtcatcatcgaggtgcttgacggcctgaaggtc
gccaactccgacgaaggcaatgccgtagtcgaagctgccgtccgtgagaaggtcctggcc
ctgaccaatcgcttcccgatgtacgactacatcggctga
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