Rhizobium rhododendri: PR018_05865
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Entry
PR018_05865 CDS
T08971
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rrho
Rhizobium rhododendri
Brite
KEGG Orthology (KO) [BR:
rrho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrho03400
]
PR018_05865
Enzymes [BR:
rrho01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PR018_05865
DNA repair and recombination proteins [BR:
rrho03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PR018_05865
Prokaryotic type
PR018_05865
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WFS24025
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All DBs
Position
complement(1172857..1174314)
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AA seq
485 aa
AA seq
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MTAVTKASGCTILWFRKDLRLDDNLALHAACEKGRPIIPLYIREPDKDGTGPLGAAQRWW
LHHSLTALQASLRNLGSDLIFASGEALSALSRLIETSGATGVVWNRRYDPAGIAVDTEIK
RQLAERGIEATSFAGQLLHEPSKLMTGGGTPYRVYTPFWRALESRGEPPEPLDAPKEITA
PEAWPDSEPLSDWKLLPTKPNWALSFSDVWVPGEASARERLDDFVDEALTGYKADRDFPA
KPATSMLSPHLALGEISPARIWYATRNLPKSTPQDDVIHFRKELAWRDFSYHLLFHFPAL
PSANWNKRFDAFEWRTETDLFEDWTQGRTGYPIVDAGMRQLWKHGWMHNRVRMIVASFLI
KDLLIDWRKGEEWFRDTLVDADPASNAASWQWVAGSGADASPFFRIFNPILQGEKFDPEG
TYVREFVPELAELGNKYIHRPFEAPASVLGKAGIALGKTYPNPIVDHAKARDRALKAYSA
VKDAA
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgacagcagtgacgaaggcgagcggatgcaccatcctttggttccgaaaggacctccgg
ctcgacgacaacctcgcgctgcatgccgcctgcgaaaaaggccggccgatcattcccctc
tatatacgcgaacccgataaagacggcacgggaccgctcggcgccgcacagcgctggtgg
ctccaccactcgctgaccgcgcttcaggcgtctctccgcaaccttggcagcgacctgata
tttgcaagcggcgaggcactttccgcgctctccaggcttatcgaaacctcgggcgcgacc
ggcgtcgtctggaaccgccgctacgacccggccggtatcgccgtcgacaccgagatcaag
cggcaactcgccgagcgcggcatagaggctaccagcttcgccggccagctgctgcatgag
ccttcgaagctgatgaccggcggaggcacaccctaccgcgtgtacacgccgttctggcgg
gcgctcgaaagccgcggcgagccgccggagccgctggatgcaccgaaggaaatcacagcc
cctgaagcgtggccggacagcgagccattgtcggactggaaactgctgccgacaaagccg
aactgggcgctgtcgttctccgacgtctgggtgccgggcgaggcatcggctcgcgaacgg
ctcgacgacttcgtcgacgaggcgctgaccggttacaaggcggatcgtgatttcccggcc
aagcccgcgacctcgatgctttctccgcatctggcactcggcgagatatcgccggcccgc
atctggtatgcgacgcgcaacctcccgaagagcacgccgcaggacgacgtcatccatttc
cgcaaggaactggcctggcgggacttttcctatcatctgctgtttcacttcccggccctt
ccctccgccaactggaacaagcgtttcgacgccttcgaatggaggacggaaacggatctg
ttcgaggactggacgcaagggcgcacaggttaccccatcgtcgatgccggcatgcggcag
ttgtggaagcatgggtggatgcacaatcgcgtccgcatgatcgtcgcctcgttcctgatc
aaggatctgctgatcgattggcgtaagggcgaggagtggtttcgcgatacgctcgtcgat
gccgatcccgccagcaatgctgcctcctggcagtgggtcgcgggctccggggccgacgcc
tcgccgtttttccgcatcttcaatcccatcctgcagggcgagaaattcgatcccgagggg
acgtatgtccgcgagttcgttccggaactggccgaactcggcaacaagtacattcaccgg
ccgttcgaggcaccggcatcggtgctcggcaaggcgggcatcgccctcggcaagacctac
cccaacccgatcgtcgaccacgcaaaggcccgtgaccgggcgctgaaagcctatagtgca
gtaaaggacgccgcatga
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