Rhizobium rhododendri: PR018_06125
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Entry
PR018_06125 CDS
T08971
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
rrho
Rhizobium rhododendri
Pathway
rrho00541
Biosynthesis of various nucleotide sugars
rrho01100
Metabolic pathways
rrho01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rrho00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PR018_06125 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rrho01005
]
PR018_06125 (kdsA)
Enzymes [BR:
rrho01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
PR018_06125 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
rrho01005
]
Lipid A
PR018_06125 (kdsA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
STAS
Motif
Other DBs
NCBI-ProteinID:
WFS24072
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All DBs
Position
1226890..1227735
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AA seq
281 aa
AA seq
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MSHSTNSDVVAGEGPGKVTFSNSKRLSLIAGPCQMESRDHAFTIAGKLKELCASLGIGLV
YKSSFDKANRTSLSAQRGLGLEAALEIFADLKQEYGFPVLTDIHTEEQCALVAKTVDVLQ
IPAFLSRQTDLLVAAAKTGRIINVKKGQFLAPWDMKNVLAKLNDSGNPNILLCERGASFG
YNTLVSDMRSLPIMAAMGAPVIFDATHSVQQPGGQGASSGGQREFVETLARAAVAVGVAG
VFIETHEDPDHAPSDGPNMVHLKDMPQLLEKLLAFDAIAKA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgagccattcgacaaattcggacgtggtcgccggcgaaggccccggcaaggtcactttc
tccaacagcaagcgcctctcgctgattgccggtccctgccagatggagagccgcgaccat
gccttcacgatagccggcaagctcaaggaactctgcgcctcgctcggtatcgggctcgtc
tacaagtcgtccttcgacaaggccaaccgcacatccctgtccgcccagcgcggccttggg
ctggaagcggctctggagatcttcgccgatctgaagcaggaatacggtttcccggtgctc
accgacatccacacggaagagcagtgcgcgcttgtcgccaagaccgtggatgtcctgcag
atcccggctttcctgtcgcgccagaccgatcttctggtcgctgccgccaagaccggccgc
atcatcaacgtcaagaagggtcagttcctcgccccctgggacatgaagaacgtgctggcc
aagcttaacgacagcggaaacccgaatatcctgctctgcgaacgcggagcctccttcggc
tacaatacgctggtctccgatatgcgctcgctgccgatcatggcggcgatgggcgctccg
gtgatcttcgatgctacccactccgtgcagcagcccggtggccagggcgcatcgtcaggc
ggccagcgcgaattcgtggaaacccttgcccgcgcggccgttgccgtcggcgtcgccggc
gtctttatcgaaacccacgaggatcccgaccatgcgccgtccgatggccccaacatggtg
catctgaaagacatgccgcagctgctcgaaaagctactggcattcgacgccatcgccaag
gcctag
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